| Id Trinity | TRINITY_DN48773_c1_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_420848 |
| Sequence | CTTTTAAATGTTATAATCTTGAAAAAAGAGAAGCTATAAGCTGCTTTCAAATTTTTTTTTTATCTAATGGCTTTAAGTTAAAAAGCTACATGCTAGCTTG GGAAAATTGCTATAAGAAACTCAACTAAAAACCATCAAAGAACCTTCTCTTACTTCATCAACTTACCCTTTCTTCCACTGTTAAATTCAGATTCTTCAAT CTCTCTCTATCTTGTCCTTCTCTTTCTTTCTTTTTCATTCCATTTTTGAGAACAATAAGTGAGTACAACAGCACTAGTCTTAGGTAGTAAAGTTTGATGT CTGTGCCATTAGAGCAAAACTATGCAGCCTTATCACCAGAGATTCTAACAATGGAAAAAGCCTCTGAACCATTTTCTCATAAAACTAAAACCACAACATG TAGCAGTGGCTTGAACCTTAAGGCAACTGAACTGAGACTAGGCTTGCCTGGTTCTGAGTCACCAGAGAGAGATGAGAATAATGTTGCTGTCTACCCTTTA TCCATGCACAACAAGTGTTTTGTGTCTGGTGCCAAAAGGGGTTTCTCAGATGCCATTGGTGGTGGTTCTGGCAAGTGGATTCTATCTGGAAATGGTGATT CTGAGGTGGGTTTGGGTAAAGATGGTAACTTGTTCTCTCCTAAGGGTGTTATTGTTGCTAAGGCTCTTGTTGGAGCTGAGTGTACTAATCAAGATAAAGT TCCTCACTCATCAATGACATTGAATGAGAAGAAGCATCAGATATCTGCTACTGCTGCAAAGTAGTATCTTCTTCCTTTATCCTTATCAGTCTTCTCTTCT TGTTTGTAGTGTTAATTTCTTTGTTGCTATACTATGTTTTACTTGTCAAATATTTCTCTACTTTTGTTGTTGTCACCCATTTTGGTTCGTGTAAAATTCC CTATTATGTTGTTAATTGTGCCTTCTTATGCGAATCAGGGAACAAGTTGTAGGATGGCCTCCAATCCGTTCTTTCAGGAAGAACTCAATGGCTATTCAGC CTCGAAAAAATAATGATGATGATGATGATGATGCCGAAACCAAGTCTGGTTGCCTTTATGTAAAAGTCAGCATGGATGGTGCTCCTTATTTGAGGAAAGT GGATCTCAAAAACTTTGCCACTTACAGAGAACTATCTTCAGCACTGGAAAAGATGTTTACTTGTTTTACAATCAGTGAGTTCTTTTTCTACTTGCAAAAT TGCAATAAGTGATTCTGGTTAGACAAATATAGAGAACTTATCCTGATCAAATCAAGCACCCTTTTAAATCTATGTGATCATTAAATCATGATCCTAAGTC TTTGACTATCACAGCCTCGGGTCAGTTGGTTCTATCAGCTGAGAAAACTTGTAGGAGTGCTATGAATAAGTCTATTAGTAGTGTTACAGAGACGGCGATA AGCGATCTCTCCCGAAAGTTTAAGCCTACATGATGCACACAAGCCCATCTTTACCATGTAATGAAATTCGGGTGCAAGTATATGAGTAACTTTATAATAG ATTCTGATGTTTATATGGCAAGTGCAGGCCAATGTGGCTCTCATAAGTTGTGTGAAAGCAGATTGATGGACCTCCTCCATGGTTCCGAATACGTGCTCAC CTATGAAGACAAGGATGGTGATTGGATGCTAGTTGGAGATGTTCCATGGGGGATGTTCACTAACTCTTGCAAGAGATTGAGGATAATGAAAAGTTCTGAA GCAATTGGACTAGCACCTAGAGCCATGGAAAAGAGCAAAAGTTGCAACTAGCACAATGCTGCTGATACAGAAAGATTCAAACTCACATTAAAGCACATCA TATCATATGATATCAAAAGCAGGGTAGAGTTGTGGCATCTCTTCCTTGCTTGTGTATAATTCTACATATGAAATTTTCTTAAGGTTTTCTTAGGTTTGTT TCCCCACCATTTCTCTTGACCACTGTTTTTGTGGACTTCATAGGGCTAAAGCTAAGTTTGAAGGTAAGTTTTGTATTTCTTTAGTAACTTATATGCTTTG TCTCAAAAGGTTCATGTAAGTAAGCATTTTCATTCAAGGAACAGAAAATAAGACCATACTTTGTTGTGTTCTATGAAGAAATTTTATGGTTTTCCTCACT TTTGGAGCATATCATATGAGCTCTTGTACAACAAATTTCCACAACTTGTC BLAST |
| Tissue | pods |
| Gene name | LI_gene_163882; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_420848
| Blastp | Auxin-responsive protein IAA27 from Arabidopsis with 53.06% of identity |
|---|---|
| Blastx | Auxin-responsive protein IAA30 from Oryza sativa with 76% of identity |
| Eggnog | auxin-responsive protein(ENOG410YEX5) |
| Kegg | Link to kegg annotations (AT4G29080) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019448380.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |