| Id Trinity | TRINITY_DN48782_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_420878 |
| Sequence | AAAAGAAAAGAACCAGAAAATATAATCCTAAGCGACGTCGTTTTATAATGGAAGCTTCATTTCTCGATCTCTAAACGAATCTAACTTCTTATTGCTATGG CGTCGTGGCTCAAAGCTGCTGAAGATTTATTTGAAGTTGTAGACCGGAGAGCGAAGTCAGTTGTCCATGACTTAGCAGATGAGCAGTCTGATTCTAAGTC TCCAGCCTCTAATGGGCAAGGATCTCAAGGCAAGAGGACAAAATCAAAATCTAAGGCTCAAAAGGGACTATCTAAACCATCAACTATAATTAGCGATGCT ACAGATACTACCAAGGAGAAAATTGGCACTCCAGTAGCACCGGTGGATATATCAACTCTGACAGAGAAAGTTGATCTTGTAGCTGAGAATGATGGGAGTC CTTCTGTCTCTACAATCCTGCCAAACAAGGAACAGCAATTGACTGATTCAGCATCACCCTTGTTAGGGACTTCATTGTCAAATATACTAGCTGAGGATGT TAGTAAACATGAAAAAAATGATGTGGAAGTTTTAGCAACTGATACTGGTGTTGAGGTTGCCACTGTTTCTGAAAATGGTGAGCCTGCTATGGAGAATACT TCAGATATTCATGAGGAGGATTCTCTTTCAGTTTCCAAGGGAATCAAAGGCCTCAGTGACGAACCCGCTAATACTGGTCAAATTATCAACTCCGGAGATT TAGATGCCAATCAAAATATGGATCAAGATAAATCTGAGTCTGTGGTTACTGACATTGCTCCTAATAATGATGCTATACCTAAATATTCTGATGTAAAACC TGAATCTATTGTGAACCAGACGAGCCAAGAGGATCATAAAACTGAAATTTCCCCTAAGAAAGTACAAGATCAACTTGACGAGGCTCAAGGATTGCTTAAA ACGGCAAAATCTACTGGTCAGTCTAAAGAGGCAAGGTTAGCTCGGGTCTGTGCTGGACTATCATCCCGCCTTCAAGAATACAAATCCGAAAATGCACAGT TAGAAGAGCTTCTCACTGCAGAGAGAGTGCTTAGTAAATCATGTGAAGCTAGGATAAAACAGTTACAGAAGGATTTGTCTGAAAGTAAAAGGGAAGTAAC AAGAGTTGAATCAAATATGGCTGAGGCCTTGGCAGCAAAAAATGCCGAAATTGAGACACTTCTGAGTTCTATGGAAGCGGTTAAGAGGCAGGCTGCATTG TCAGAGGGAAATCTAGCTTCCATGCAGGCAAGTATGGAGTCTATGATGAGAAACCGAGAACTATCAGAGACAAGGATGATGCAGGCTCTAAGAGAGGAGT TGGCTTCTGCAGAGAGAAGAGCTGAAGAGGAGCGTGCTGCACATAATGCTACCAAAATGGCTGCTATGGGAAGAGAAGTTGAACTGGAGCAAAGAGCAGT TCAGTCATCTACAGCCCTTGCAAGGATACAGAGAATAGCAGATGAGAGGACAGCAAAGGCCACAGAACTTGAGCAGAAGGTGGCACTTCTCGAGGTTGAA TGTTCATCTTTAAATCAAGAACTGCAAGATATGGAAGCCCGTGTGCGCCGTGAACAAAAGAAGCCACCAGAAGAGGCAAATCAAGTAATTCAGGTGCAGG CATTGCAAGAAGAAGTGGAGCGGGCACGTCAGGGTCAAAGGGAAGCTGAAAACAAACTTTCTTCCTTCGAGGCTGAAATGCAAAAAATGAGAGTTGAAAT GGCTGCCATGAAGAGGGATGCTGAGCATTACTCACGCCAGGAGCATATGGATTTGGAGAAACGCTATCGGGAATTAACTGACCTCTTGTACTACAAACAA ACACAATTAGAAACTATGGTCAGTGAAAAAGCTGCTGCAGAGTTTCAAATGGAGAAGGAAATTAAGCGTCTTCAAGAAACACAGGCAGAGGCTGAAAGAA GTAGGATTTCTCGTCGAGCATCAACATCTTGGGAAGAAGAGACTGATATTAGATCCCTTGAGTCTCTTCCTTTGCATCACCGTCATATGGCTGGTGCAAG TATTCAGTTGCAGAAAGCAGTAAAACTGTTAGATTCAGGGGCTGTGAGGGCCACAAGATTTCTGTGGCGTTATCCAAAAGCTCGAGTCGGTCTATTTTTC TATTTGGTGTTTGTTCATCTCTTCTTGATGTATCTCTTGCATCGCCTTCAGGCACAAGCTGAATTTTTAGCTGCTAGAGAAGTTGCAGAATCTATGGGAC TTTCTAACCACAGTTTACCATGATTTACCTAAATATTCCGCTGTGGGCCTATCCTTTCCTGATTATATTTTCGAGTATACATTTCCGGTGTGGCTGCTTA GATTGGCTAGATAATTGTTCAGCAAAATACTTAATTCTGCAAACCAAAAGAAGAACTTATGCAGGAGCATCTTATGTCTCCATCTGATCATTAGAGAAAA TGTTGCTTGTTGGAGTTGGGAAAATTGGAATTTGCTGAAGCTGAATGATTGAATTGGTTCATTACATATTTGTGTTTATTTTATTGACACAGCAAATGTA TTTCTGGTGGAAGAAACAATGCTGTAGATACAAATTACTTTTGTGATATCCTTCTCTTTCTATCTTCCAATGGCAATTGCCAAAACAGAGGCTATATACC AAATTTGCATGTAAGAGAAATATTTGTACTTACTATATATATAGCTTATTAACCTTGGGAATATAATTGATGATTATTTTGTTCCTTACAAGATTTAAAT GGGAATATAATGACACAAGTTATGTG BLAST |
| Tissue | pods |
| Gene name | LI_gene_163934; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_420878
| Blastp | Golgin candidate 1 from Arabidopsis with 60.06% of identity |
|---|---|
| Blastx | Golgin candidate 1 from Arabidopsis with 60.06% of identity |
| Eggnog | NA(ENOG410YXNC) |
| Kegg | Link to kegg annotations (AT2G19950) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019448363.1) |
| Pfam | Golgin subfamily A member 5 (PF09787.8) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |