Ll_transcript_420882

• Id Trinity: TRINITY_DN48782_c0_g1_i5
• Name Transcript: Ll_transcript_420882
• Sequence: TCTGATTCTAAGTCTCCAGGTTTAGATTTTGGATCTTGTCTTAATTCTCTCCCTTCTATTTAGCAATAAATTTTTGCTGAATGCCTTATCTGGAATCAGT GCTGGTTTATTGTTATGGAGATTTGCTAACGATTTATAGTGGAAAGATTAAACTTTTAAATACCTGGTGATTAGAGGGTTTCTTGTGCTCTATACTTTAA AATCTTAACATTAATAGTCCTTAAATTTAAACCTAAATTTACATTTCTTATTTATTTTCTCTAATCTTTTTGTTGAAATAAACAAATATGTAAACTGATT CATGTTAAAAAAACCGAAATTACCTTTTATCAACTCAAAAGTATAGTTGATAGTTGATACTTCAACTCTGATGTTGTAAGAAGTAGGATTGACATTTTTC ACAGAATTGGCCTTCTGTTGGAAGTTAATTGTGTTAATAGCATGTTATTTTAAACTACATCCAAACAACAAACCTTTTACATTTTCTTTTGGAAGTTACA CATTTGCCTTGTTAGCAGGTGAACCTGTAAACCTGATCTCATGTCTTTGAGAAATTAGTATTATGTTCTAGCATATTCTCCTAACAGTACAAGTACTTAC AGTTTTTTTATTGCTACCTCTTTGATAATTAGCCTCTAATGGGCAAGGATCTCAAGGCAAGAGGACAAAATCAAAATCTAAGGCTCAAAAGGGACTATCT AAACCATCAACTATAATTAGCGATGCTACAGATACTACCAAGGAGAAAATTGGCACTCCAGTAGCACCGGTGGATATATCAACTCTGACAGAGAAAGTTG ATCTTGTAGCTGAGAATGATGGGAGTCCTTCTGTCTCTACAATCCTGCCAAACAAGGAACAGCAATTGACTGATTCAGCATCACCCTTGTTAGGGACTTC ATTGTCAAATATACTAGCTGAGGATGTTAGTAAACATGAAAAAAATGATGTGGAAGTTTTAGCAACTGATACTGGTGTTGAGGTTGCCACTGTTTCTGAA AATGGTGAGCCTGCTATGGAGAATACTTCAGATATTCATGAGGAGGATTCTCTTTCAGTTTCCAAGGGAATCAAAGGCCTCAGTGACGAACCCGCTAATA CTGGTCAAATTATCAACTCCGGAGATTTAGATGCCAATCAAAATATGGATCAAGATAAATCTGAGTCTGTGGTTACTGACATTGCTCCTAATAATGATGC TATACCTAAATATTCTGATGTAAAACCTGAATCTATTGTGAACCAGACGAGCCAAGAGGATCATAAAACTGAAATTTCCCCTAAGAAAGTACAAGATCAA CTTGACGAGGCTCAAGGATTGCTTAAAACGGCAAAATCTACTGGTCAGTCTAAAGAGGCAAGGTTAGCTCGGGTCTGTGCTGGACTATCATCCCGCCTTC AAGAATACAAATCCGAAAATGCACAGTTAGAAGAGCTTCTCACTGCAGAGAGAGTGCTTAGTAAATCATGTGAAGCTAGGATAAAACAGTTACAGAAGGA TTTGTCTGAAAGTAAAAGGGAAGTAACAAGAGTTGAATCAAATATGGCTGAGGCCTTGGCAGCAAAAAATGCCGAAATTGAGACACTTCTGAGTTCTATG GAAGCGGTTAAGAGGCAGGCTGCATTGTCAGAGGGAAATCTAGCTTCCATGCAGGCAAGTATGGAGTCTATGATGAGAAACCGAGAACTATCAGAGACAA GGATGATGCAGGCTCTAAGAGAGGAGTTGGCTTCTGCAGAGAGAAGAGCTGAAGAGGAGCGTGCTGCACATAATGCTACCAAAATGGCTGCTATGGGAAG AGAAGTTGAACTGGAGCAAAGAGCAGTTCAGTCATCTACAGCCCTTGCAAGGATACAGAGAATAGCAGATGAGAGGACAGCAAAGGCCACAGAACTTGAG CAGAAGGTGGCACTTCTCGAGGTTGAATGTTCATCTTTAAATCAAGAACTGCAAGATATGGAAGCCCGTGTGCGCCGTGAACAAAAGAAGCCACCAGAAG AGGCAAATCAAGTAATTCAGGTGCAGGCATTGCAAGAAGAAGTGGAGCGGGCACGTCAGGGTCAAAGGGAAGCTGAAAACAAACTTTCTTCCTTCGAGGC TGAAATGCAAAAAATGAGAGTTGAAATGGCTGCCATGAAGAGGGATGCTGAGCATTACTCACGCCAGGAGCATATGGATTTGGAGAAACGCTATCGGGAA TTAACTGACCTCTTGTACTACAAACAAACACAATTAGAAACTATGGTCAGTGAAAAAGCTGCTGCAGAGTTTCAAATGGAGAAGGAAATTAAGCGTCTTC AAGAAACACAGGCAGAGGCTGAAAGAAGTAGGATTTCTCGTCGAGCATCAACATCTTGGGAAGAAGAGACTGATATTAGATCCCTTGAGTCTCTTCCTTT GCATCACCGTCATATGGCTGGTGCAAGTATTCAGTTGCAGAAAGCAGTAAAACTGTTAGATTCAGGGGCTGTGAGGGCCACAAGATTTCTGTGGCGTTAT CCAAAAGCTCGAGTCGGTCTATTTTTCTATTTGGTGTTTGTTCATCTCTTCTTGATGTATCTCTTGCATCGCCTTCAGGCACAAGCTGAATTTTTAGCTG CTAGAGAAGTTGCAGAATCTATGGGACTTTCTAACCACAGTTTACCATGATTTACCTAAATATTCCGCTGTGGGCCTATCCTTTCCTGATTATATTTTCG AGTATACATTTCCGGTGTGGCTGCTTAGATTGGCTAGATAATTGTTCAGCAAAATACTTAATTCTGCAAACCAAAAGAAGAACTTATGCAGGAGCATCTT ATGTCTCCATCTGATCATTAGAGAAAATGTTGCTTGTTGGAGTTGGGAAAATTGGAATTTGCTGAAGCTGAATGATTGAATTGGTTCATTACATATTTGT GTTTATTTTATTGACACAGCAAATGTATTTCTGGTGGAAGAAACAATGCTGTAGATACAAATTACTTTTGTGATATCCTTCTCTTTCTATCTTCCAATGG CAATTGCCAAAACAGAGGCTATATACCAAATTTGCATGTAAGAGAAATATTTGTACTTACTATATATATAGCTTATTAACCTTGGGAATATAATTGATGA TTATTTTGTTCCTTACAAGATTTAAATGGGAATATAATGACACAAGTTATGTG
• Tissue: pods
• Gene name: LI_gene_163934;
• Additional information: details;

Expression of Ll_transcript_420882

FPKM

• PAB: 0
• PNAB: 0.2
• PS1: 0.1
• PS2: 0.7
• PS3: 0.7
• PW1: 0.3
• PW2: 0.6
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_420882

• Blastp: Golgin candidate 1 from Arabidopsis with 75.59% of identity
• Blastx: Golgin candidate 1 from Arabidopsis with 58.98% of identity
• Eggnog: NA(ENOG410YXNC)
• Kegg: Link to kegg annotations (AT2G19950)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448363.1)
• Pfam: Golgin subfamily A member 5 (PF09787.8)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;