Ll_transcript_419652

• Id Trinity: TRINITY_DN48783_c0_g1_i4
• Name Transcript: Ll_transcript_419652
• Sequence: ATTGCATATTCACAATATTACCGGATCGAAAATGTTGCATCCCTTAAGACTTTAAACGCAACACCAACCGTCGGATCACGCTGATTTTCTGATCACGGTC GTTTATATGTTCCCCTCGTCTTCTCTTTCCATTCCTTTGGTTCCTTTGAGTGCCAACACAACCGCAGCCACAAGAGAAGAACGAAGAAGTAGCAGCAACA CCATTCTGGAGGAAGAAGTTAGGGTTGTGTGATTCGATGGAGAAGGAGTTGTTGGAATTGTATGAATCGGCGAAGAAGGCAGCTGATGCGGCGGTCTCCG GTGACGGAGAATCTGATGAAAGTAGATGTATTGATGCGCTTCAACAGCTCAAGAAATTTCCTGTTAATTACAAGATTCTCGTCAGCACCCAGGTAGGTAA ACATCTTAAATCCCTGACGAAGCATCCAAGGCAGAAAATTCGTGCCTTTGCTATTGACCTAATTGAGATATGGAAAAACATAATTATTAAGGAAACAAGC AAAAATAAGAATGGGGGCTCTGATAATAAGGTTGAGCCAGCTAATGGGGAGAGCGCTAAAGCTGGAAAATTTCAAAGGAGTCTTTCTGTGAAGGTTGAGA AGACTGAAACTGTCAAGGTTGAGAAAATTGATAGGAATGGTACACCAAGGTCAAGCTCAGACAGTACAAAGAGAACACAAAATATGGATGTCAAAATTGA AAAAACTGACCGTGCTGCAAATGTTAAGGTGGAGAAGCAAGTTTCTGCCGTGAAGAGAACATCGTCCAGCTCTGCTGCTCCTCCGAAGCTAAAGACTATG ATTAAATCTAATGATTCGGTTCGAGACAAAATTAGAGAACTTCTCCAAGAGGCTTTATCCAAGGTTCCTGGAGAGGCTGATGAAGATGTCCTGGATGAAG TTAATGTTTGTGACCCTATTCGTGTTGCTGTGACAGTGGAGTCTCTATTATTTGAGAAGTGGGGTCCTTCTAATGGTGCTCAAAAGGTCAAGTATAGGTC CTTAATGTTTAACCTTAAGGATCAAAATAACCCAGATTTCCGGAGAAAAGTTCTACTCGGTGTTATCAAGCCAGAGCGACTAATCGACATGAGCACATCA GAAATGGCTAGTGAGCGAAGGAAACAAGAAATTCAGAAACTCGAAGAGAAAGCTTTGTTTGAATGTGAGCGTGGAGCTCAACCAAAAGCCACAACTGATC AATTTAAGTGTGGTCGATGTGGTCAAAGGAAGACCACCTATTACCAAATGCAAACTCGCAGTGCTGATGAGCCTATGACAACCTATGTCACTTGTGTTGT CTGCAATAACCGTTGGAAGTTCTGTTAGTGTAATGGTCACTGGTCGGTTATTGTCATTTGTTGCTGATTTAGGGTATCAAGCTGGGTGTCATTATGGTTC ACACTACAGCCTTGCCAAAATTTTCTATTTAGAACTGTTACATGTAGAACTTTTTAGGCAGTAGTGTGTTTTTTTATTCTTTTAAGTGTTAACTGAAGTT ATTTCATTATAGTAATGTGTTGCGGCTGTGACTTATACCCTAGTCTGTTATAAAATTGCTCCAATGTATTTTCCTCATGTTTCTGCTTGTTAGTAAACTA CAGTATTGAAACCTAGCTTGTTTGAAAATGAAAGTGCATTCTCTGGTATTAACCCAGGTTTTCTCTGTTCAAAAA
• Tissue: pods
• Gene name: LI_gene_163944;
• Additional information: details;

Expression of Ll_transcript_419652

FPKM

• PAB: 21.3
• PNAB: 28.9
• PS1: 24.5
• PS2: 23.7
• PS3: 26.8
• PW1: 28.6
• PW2: 29.9
• PW3: 24.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_419652

• Blastp: Transcription elongation factor TFIIS from Arabidopsis with 53.85% of identity
• Blastx: Transcription elongation factor TFIIS from Arabidopsis with 53.61% of identity
• Eggnog: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (By similarity)(COG1594)
• Kegg: Link to kegg annotations (AT2G38560)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019417297.1)
• Pfam: TFIIS helical bundle-like domain (PF08711.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;