| Id Trinity | TRINITY_DN48783_c0_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_419654 |
| Sequence | GCCACAACAACACCGTTCTCGTAACTTCTCTCACTCTTTTCCCTTTTCATTATTCAAAAAACGTTTCATATTTTTCATTCTTTTATTTTACTGTTTCGCT GCGGGTTCAGGAGGAAGTGAATAGTGTTGTGTGGTTCAATGGAAAAAGAGTTGTTGGAATTGTACGGAGCCGCGAAGACGGCGGCTGATGCGGCGAGCTC CGGCGACGGAGAAGTCGAAGAAAGTAGATGCATTGATGCGCTTCAGCAGCTCAAGAAATTTCCCGTCAATTACAAGATTCTCGTCACCACTCAGGTGGGT AAACATCTTAAGTCTCTGACGAAGCATCCAAGGCAGAAAATTCGAGCCTTTGCTGTTGACCTAATTGAGATATGGAAAAACATAATTATTAAGGAAACAA GCAAAAATAAGAATGGGGGCTCTGATAATAAGGTTGAGCCAGCCAATCGTGAGAGAGCTAAAGCTGGGAATTTTCAAAAGATTCCTTCAGTGAAGGTTGA GAAAGCTGATACTGTCAAGGTTGAGAAAATTGATAGGAATGGTACACCAAGGTCAAGCTCAGACAGTACAAAGAAGGCAGAAAACGTTGATCTCAAAATT GAGAAAACTGATCGTGCTGCAAATGTCAAGGTGGAGAAGCAAGTTTCCGGGGTGAAGAGAACATCGTCCAGCTCTGCTGCTCCTCCGAAGCTAAAGACTA TGATTAAATCTAATGATTCGGTTCGAGACAAAATTAGAGAACTTCTCCAAGAGGCTTTATCCAAGGTTCCTGGAGAGGCTGATGAAGATGTCATGGATGA AGTTAATGCATGTGACCCTATTCGTGTTGCTGTAACAGTGGAGTCTCTGCTATTTGAGAAATGGGGTCCTTCTAATGGAGCTCAAAAGGTGAAGTATAGA TCCCTAATGTTTAACCTAAAGGATCAAAATAACCCAGATTTCCGGAGAAAAGTTCTACTCGGTGTTATCGAGCCAGAGCGATTGATCAACATGAGCACAG CCGAAATGGCGAGCGAGCGAAGGAAACAGGAAAATAAGAAACTTGAACAGAAAGCTTTGTTTGAATGTGAGCGCGGAGCTCAACCAAAGGCCACAACTGA TCAATTTAAGTGTGGTCGATGTGGTCAAAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_163944; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_419654
| Blastp | Transcription elongation factor TFIIS from Arabidopsis with 51% of identity |
|---|---|
| Blastx | Transcription elongation factor TFIIS from Arabidopsis with 52.52% of identity |
| Eggnog | DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (By similarity)(COG1594) |
| Kegg | Link to kegg annotations (AT2G38560) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019437269.1) |
| Pfam | TFIIS helical bundle-like domain (PF08711.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |