| Id Trinity | TRINITY_DN48784_c1_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_420960 |
| Sequence | TCCAATTTTATTTCTTATTAAAATCTTATCATTACTAAAACAAATAAATTGTATTCAATAATTGCATGATAATATACTTATTTAGTAATTTTGTCATGAA ATTAAATCTCTTCTTTCTTTCATTGATATACTTACCTTGTCTTGAAGAATGATCTCCTATGTCTCGCACCTATGACATTGAATCAAAAATTGTAAAAAAT AATAAAAAATATTTTTTTAATTGATGTAATATGTTTTTATTGGTAAGATACATTATTTTAAATTGTGTTTGCTGTCGCGCGATTGCGGTCATTACAATGT GAAATATTTTGTGATTAAAAAACTATTTTTAAATACGATACAGCACGTTGTAGTCCAAATACGGTCCGATGTGCGCGGTTGCATTGTAGCCCGATCCGGC CGCATAATTGTGATTCAGAATCACACCGAAATTGTGGTTCCATACGGTTGCACCCGTTACCGCAACTGCAATATCGTAGCCGCAATTTAAATCACTTCGT ACGACATGATCCATTTTGTCTATCTATGTTGATGGATCATGTAAAATTTAGTGTGCAATTATCATTTTTGATGCTATGATCATTATTATTGGTTGAAAAG GTGTGAAGGAGCTAGTGGATGGTGGTGTTCCACCAGGGTTTGTTCTACTAGATGATGGGTGGCAATCAATAAGCCATGATGAAGACCCTATAACCAAAGA AGGCATGAGCCACACTATAGCTGGTGAACAAATGCCATGCAGGCTAATCAACTATGAAGAGAACTACAAGTTCAAAAACTATGTTAGTTCCAAAGGTGAA AAGGGTTTGAAAGGATTTGTGAATGAGTTAAAGGAGTTTGAGACATTGGATTATGTTTATGTGTGGCATGCATTGTGTGGATATTGGGGTGGGATAAGGC CTAATGTTTCAGGTATGCCTGAGGCTGTGATTGAGAAACCAAAGTTGAGTGTTGGGTTGGAGACAACTATGGAGGATCTTGCTGTGGATAAGATTGTTAA TAATGGTGTTGGATTGGTTACACCAAACATGGTTCATCAAATGTATGAAGGGCTTCATTCACATTTGGAGAATGCTGGGATTGATGGGGTTAAGGTTGAT GTCATCCATTTACTAGAGATGGTGTGTGAGAAATATGGTGGAAGAGTAGAATTAGCAAAAGCATATTACAAGGCTCTTACAAATTCAGTGAGAAAACATT TCAAAGGCAATGGTGTTATTGCCAGCATGGAACACTGCAATGATTTCATGTTGTTGGGAACTGAAGCCATATCACTTGGTCGTGTTGGTATGTCATTTAC CTTAACAATTAGGACACAACATAATACATAACATATTTTTTATGTTAAAACTATTTCTCGTTTTGTATGCCTAAACATTATACTTTTCGTAAGATTGTTG CTTAGTGACATGAGGTCACGAGCTCAAATCCTGAAAACAGTCTCTCCACTTACGGGATGAGACTGTATACATTTACCTTCCTCAGACTCCATGATACGTG CATTGGGCTGTCTTTTACCCGATGTGAAAAAAGATTATGACTTCGATCGAAATTATTACAGGAGATGATTTCTGGTGCACTGACCCATATGGTGATCCAA ATGGCACATTTTGGCTACAAGGGTGTCACATGGTGCATTGTGCATACAATAGCTTATGGATGGGTAACTTCATTCACCCAGATTGGGACATGTTCCAATC AACACACCCTTGTGCTGCTTTTCATGCAGCCTCTAGAGCCATTTCTGGTGGCCCTATTTACATTAGTGACACTGTTGGGAATCATAACTTTGAACTGCTT AAGACTTTGGTCTTGCCTGATGGAACCATACTTAGATGTGAGCACTATGCCCTTCCAACTAAGGACTCTCTCTTTTCTGACCCTCTTCATGATGGCAAAA CAATGCTTAAAATATGGAACCTCAATAAGGTCATTTACCCTTCTTTTACATCTCATAATTTAATTTTGTATATCTATATATGCAAAGCTTTACTAATAGA GTAATGTACCATATACAATTATGTTATGTCACACTATCACCTTAGACTTGAACAATTCTCACCATTTAAATTTTTACACTATAATTCTGTCGGATGGGGA TCACCTGTCCCAAAGCATGTCCCCAACCATGTACCAAGC BLAST |
| Tissue | pods |
| Gene name | LI_gene_163946; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_420960
| Blastp | Galactinol--sucrose galactosyltransferase from Pisum with 74.13% of identity |
|---|---|
| Blastx | Probable galactinol--sucrose galactosyltransferase 5 from Arabidopsis with 69.58% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019442543.1) |
| Pfam | Raffinose synthase or seed imbibition protein Sip1 (PF05691.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |