| Id Trinity | TRINITY_DN48784_c1_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_420965 |
| Sequence | TTTGATGAATATTTGCAGAGAAATGATGAATCCCGTTGATAATATCAATCTCTACAACACTCACCAAATGGGTTATAATTCATTACTGCCATTATCTGGC ACCACCACTGCTGATAATATTTTCCGGCCACCGTGCCACACTTTCATCGCCGCTGACTCTTTCCCTCAGAAAACAGCCATGAACTCCGGTAGCAACCTCA CCTACAATGTTCCCTTATCAAGAAAACGCTCAAGGGAGAACCCCAACACAACCACCCAACCCTACAACATGAGTAATTGTGGTTCTTTCTCGTTCCTTGG TGAACACCTTTCCCTCCATTTACATCAACAACAATTCGATATCAGCAACATCATTTCTGAGCAAATTGAGAGGCTAAGGATGGAGGTGGTGGAGAAGAGA AAGAGACAAACAAGGAAGATTATTGAAACAATTGAAGTTAGTGTAATGAAGAGACTGAAAGCAAAAGAAAACGAGATAGAGAAAATTGGAAAACTGAATC ATGGTTTAGAAGAAAAGATAAAGTCTCTTTGCATAGATAATAAAATATGGCGTGAGTTAGCACAATCCAACGAAGCCACCGCCAATGCTCTTCGAAACGT ACTTGACCAAGTCCTTATCCACCGTGACGGCGGAGCCACCATAAACCCCGCCGGAGCAGCGGTGCCGGCGCTGATGGCCGACGCCAGTTCATGTTGTGGC AGCACTGACGATGTGAAAAACAAAGAAGGTGTGTGGCGTAGGATAATAGGGTATGCGGGAGTGAAGGATAAGGAAGGTGGTGATAATAAATAATAGTAAT GGAAATAGTGATAGTAAGAGATTGTGTAGGAAGTGTGGGAAAGAGAGTATCTCCCCCAACCATGTACTAAGCCAATTAGAATAAAGAAAAAATAAATAAA AACATGAATGTTTACTTTTTTTGACTGATATGACATGTTTCTATTCGTTTGAGACAGACTTTGGGACAAGGTTTGAGACAACAAATCCTTATTCACGTAC TAAGGAAGTATTTTATGTTAATAGTTGGTTCCACATAGTTGGTTCCACCAAATATATACTTTTTACTCTCATGTCTTGTCTCATTCTATGTATAAAGTAC ACCAAATATAGAACATAACTGGTATATCTTGTTTTGTTTTTGTTCTGGCACCTTTCAAAAGCTACTTAAGTATTACTCTTATAGTCTTATATGCTTCAAT CAATGATTAAAAATAGATGCCAAAAGGAATGTAAGGAAAGTGACATGAGAATATCTTCATTGCTCTTATATATGCATGAATTTTGTCATTTAGGCCAGAA CTAGAACTAGAACATAACAATATGTTATGATTTCTGTTTTTGATGCAGTACACTGGAGTTATTGGAGTGTTTAACTGTCAAGGAGGAGGTTGGTTTCGCG AAACAAGGACAAACAAATGTGCTTCAGAGTTTTCTCATTTGGTATCAACCAATACCAACATCAAAGACATTGAGTGGAACAGAGCCAAGAACCCAATTTC AATTGAAGGAGTGCAACTTTTTGCCCTGTATTTCAGCCAGGGCAACAAACTAGTCCTTTCGTCGCCATCCGATAGCGAAGAAATTTCGTTGGAGCCCTTC AATTTCGAGCTCATAACTGTTTCGCCGGTCACTTTCTTGCATGGCAAGTCATCATCATCTGTTGTGCAATTTGCTCCTATTGGTTTGGTGAATATGTTGA ACACTGGTGGAGCAATTCAGTCATTGGCTTTTGATGAGGCTAAGAATTTGGTTGAAGTTGGAGTTAGAGGGAAAGGGGAAATGAGGGTCTTTGCCTCAGA GAAACCAAGCACTTGTAGAATTGATGGTGAAGAAGTTCATTTTCAATATGAAAGTAACATGGTGGTAATTCAAGTTCCATGGCCTAGTTCTTCAAAATTA TCCAATGTTCACTATATATTTTGAGCATGGGAATTATGAATATCATATTTTTATTTTTATTTTTATTTATTGTCGGTATTAAGGAGTCGACTTCGTCTAG TAAGATAACGGTTTGGTTGTTGTTATTTTTTAGAATGCTGTTAAGTGTTAAGGGAACTATTTTATTCCTTACGGTTTATTTGCAAGATAGGTTCCGGAGG GGGAGATAGGAAAGACTTCAGAATCTCTCACACGTGTATTTTATGATTTAGCAATCTTCCTTTTCTCTTTCTTCCCCGCCGAAACTCGACTTACAAACAG ACCCTTAGTAATTGATAGCTTGCTTTTACTACAGACACTCTATGAGGTGATGTATGTAATGAGGGCATGTTTCTTTCTAAATCAAATAAATGGTATTATT TTGTTTTAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_163946; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_420965
| Blastp | Probable BOI-related E3 ubiquitin-protein ligase 3 from Arabidopsis with 46.63% of identity |
|---|---|
| Blastx | Galactinol--sucrose galactosyltransferase from Pisum with 56.1% of identity |
| Eggnog | protein binding zinc ion binding(ENOG4111S1X) |
| Kegg | Link to kegg annotations (AT3G12920) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019425195.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |