Id Trinity | TRINITY_DN48787_c1_g1_i12 |
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Name Transcript | Ll_transcript_421169 |
Sequence | CAAATTCAAACACAGTGAACCTCAAAATTTTCTGAATCGAATCTAACTACGTTCGAATCAAACAATGTCTAATCGACAAGAAAAAGGTGTTAACGTTCAA GTCCTTCTTCGTTGCAGGCCGTTTAGCGAAGATGAGTTGCGGAGCAATGCGCCGCAAGTAGTGACTTGTAATGAATTTAATAGAGAAGTTGCAGTTTCTC AGAACATTGCTGGCAAGCATATAGATAGAGTTTTCACTTTTGATAAGGTTTTTGGTCCTTCTGCACAGCAAAAAGATCTTTATGACCAAGCTGTTACTCC TATTGTTAACGAAGTTCTTGAGGGCTTCAATTGTACCATATTTGCGTATGGTCAAACTGGTACGGGAAAGACTTACACTATGGAAGGTGAATGCAAAAGG TCAAAGAGTGGGCCTAACAAAGAGTTGCCTCAAGAAGCTGGAGTCATTCCAAGGGCTGTTAAGCAGATTTTTGATATGCTTGAGCGCCAGAATGACGAAT ATAGTGTCAAAGTCACATATTTAGAGTTGTATAATGAAGAGATCACTGATTTGCTTGCCCCAGAGGAACTTTCTAAAGTTTCTTTGGAGGAGAAGCAGAA AAAGCAGCTTCCTCTTATGGAGGATGGTAAAGGTGGAGTTCTCGTAAGAGGTTTGGAGGAGGAAATTGTTTCAAGTGCTAGTGAGATTTTTACTCTTTTG GAGAGGGGGTCTTCCAAGCGACGTACTGCTGAAACTTTGTTAAACAAGCAGTCAAGTCGATCGCATTCTGTGTTTTCTATTACAATACACATCAAGGAAG CAAACCCTGAAGGCGAAGAACTAATAAAATGTGGTAAACTGAATTTGGTTGATCTTGCTGGCTCGGAAAATATATCTCGTTCTGGGGCTAGGGAGAATCG TGCAAGAGAAGCTGGAGAAATCAATAAAAGTTTACTTACTTTAGGGCGGGTCATCAGTGCACTTGTGGAGCACCTTGGTCATGTTCCTTACAGGGATAGT AAATTGACACGTTTATTGCGTGATTCACTTGGGGGAAGAACCAAGACATGCATCATAGCTACAGTGTCTCCTGCTGTTCATTGCTTAGAGGAAACATTGA GCACACTGGATTATGCACACAGGGCAAAGAACATTAGAAATAAGCCTGAGGTTAATCAAAAAATGATGAAGTCAACTCTTATCAAGGATCTTTATGGTGA AATCGAACGCCTTAAGGCTGAGGTTTATGCTACACGTGAGAAAAATGGAGTCTATATACCTAAGGATAGATACTATCAAGAGGAGACTGAGAGAAAGGCT ATGGCTGATCAGATTGAGCAGATGGGGGTCACAATTGAAGCTCAACAGAAGCAACAAGAGGATTTGCAGAGCAAATACATTTACCAAGTCCAACAATGCT CTGATTTGAGCAACAAACTTAATACCACCGAGAAAAACTTGAACAAGACCAGCAGGTTGCTTGCGAACTCAGAGGAAGAGGTAAAAATATGTCAATACAC ATTGAAAGAGAAAGATTTCATCATTTCCGAGCAGAGAAAAGCAGAAAATGCTCTGGCTCATCAAGCATGTGTTTTACGTGCTGATTTGGAGAAAGCTCAT GCAGATAATGCTTCACTGTTTTTGAAAATTGGTAGAGAAGACAAATTGAATTCAGATAACCGAACTGTGGTGAACAATTTTGAAGTGGAGCTTGCCCAAC AGGTTGGTTCTCTCCGCAATACTGTGGCACAATCATTGTCTAAACAGAATGAACACCTACAAAGTGTGGAGAAGCTTTGTCATTCATTTTTGGGGATAAA TGATAAGACGATTATTGATTTGAAAACGAAGGTGACAGCTCTGAGGGAGTTGTATATATCTCATAACGAGGCAATGCAAAATGTTGCGCGTTTGCATAAA GCAGGCTCTGATGCTACTTTGAATGAATTATCTTCTATTATATCCTCCAATGGTCACTCTATCGAAGAATTTCTTGCATCTGAAAACGCCGAATCTGGTT CAATATTTGATGATCTTCAAAATTCTCTTTCAACCCAACAGGGTGAATTAGCTCTTTTTGCAAGGGAACTGCGACATGTATTTCTTCCATCTATCTTGTT ATAAACAATTCAGTCATAGCTTTGTTCTGTATCTTTTCCTCACTGCTTTACTTCAATTTTCTTTGAACTGACTTTTGTCCACTTCTTGTTTTGTTTTTTT TCTGTGTATTGCAAATGAAAGAGATTGAATCTCAGTGTTGAACAAATAAAGGATATATCTATGCGGTCTCAAGAATTTGTGGATAGGCTTTTTGAAGAAT CGAAAAAGCTTGAGGAGTTCACATCATCCGCTGATCATATGCAAATGAAGAACATTGCAGAGTTTAAGCAAGCTTATGAGGAGCAGTCAAGATCTGATGC AGAGAAACTTATTGTGGATATGACTAGTTTAGTTACTGATCACATTCGTCGTCAAATGGATCTGGTAGATGCAAAGCTTGTTGATCTTAGAGAAAGTGGC ATTACGAACAAGTTGTTCTTGGATGGACACGTGGCATCAGTTGGAGATATAGTGACCCATGCAAAAAGAAAATGGCAGACCTATTGTGTGCAAGCTGAAA AAGATGCCAAAGACACTGCTGATTATTCTGCAGCCAAACATTGTCGTATGGAGGAACTCCTGCAGCATAGTGTTAATACGGCTGAGTCAGCTTCGTTGCA TACAAAGAGTACACATGAGGCTGTAAATAAAATGGGGGCCAAACATATTTCAGCAGCAGTGTCACTAGTCAGGAATGCTTGTGATAACAATGTGCAACAT GACAATGAGATCAATTCTGCACGAATCGCAGCCGAGGAAGCTGTAGTGAAGAACAGCGGCGATCTTATACAGCAGTTTGATGTTATGTCTGCACAAGAGC AAGAGTGCATTACTGGCATGGCTGATGTGGTGAAAACTCATGCGAATACACTCGAGGTGTTCCGAGAGGATCATTCTCGCCAAACTGCTTCCATTGAACA CAAGTCCTGCGAAACTTTTCAGCAATCCTATAGGGACTATGAACCCAGTGGTACTACACCATTAAGGTGTGAACCTCATGTTCCAAGTAAAGGGACAATT GATTCTCTTAGAACCTTGCCAATGGAACAGCTTGTTGAGGAATTCAGGGAAAATAATTCATATGAATCTTCTAATGAAAAGGAAAAGGAACCTTCCCTTA TTCCACGTTCTCCCTTCACCCAATTGAACTAACTGTTATAGGAACTTGCTTGGTTAGGACTTGGAATCAATTTTTTATTGCACGTTGTATTGTTGTATTA AAAGCTCAAAGCATGCATCATTATTTGATGAGATGTAGTGTAAAACATAGACAAAATTGCTTATGTATATCCCATCATGGGATCAAATATATGTTAAATG TATTATTTTTGGAGAACTCTACTTTGAAGTGCATACAGTACCTAAC BLAST |
Tissue | pods |
Gene name | LI_gene_163964; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_421169
Blastp | Kinesin-like protein KIN-5C from Nicotiana with 81.28% of identity |
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Blastx | Kinesin-like protein KIN-5C from Nicotiana with 69.52% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (107774014) |
CantataDB | Link to cantataDB annotations (CNT0000639) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019432902.1) |
Pfam | Microtubule binding (PF16796.4) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |