Ll_transcript_421161

• Id Trinity: TRINITY_DN48787_c1_g1_i4
• Name Transcript: Ll_transcript_421161
• Sequence: CGAGAACAAAAAAACCACATCATTTAACACCATCAAATGATGATCCCGAATAACCAAAACCCGTAGATTATTATTACATCAAACCAAAAAAATAAGACAA TCTCCAAATTCAAATATAAAGCCCTCCCGCTACACAAAAGAAACAATAAAAGAACCAAACGGATCGCTCTTCTCTTCTCTCCCATTCCCATTAATTTAAT TCTCTGCTTCCAATTAGATCGCAAAAAAAATGTCTCATCGCCACGAGAAAGAGAAAGGTGTGAACGTTCAGGTCCTCATTCGTTGCAGGCCGTTTAGTGA TGAAGAGTTGCGAACCAACACTCCTAAGGTTTTGACATGCAATGATTATATGAGAGAAGTAGCCGTTTCTCAGAACATCGCCGGAAAACACATCGACAGA GTTTTCACTTTCGATAAGGTTTTTGGTCCTAATGCACAGCAAAAAGATCTATATGAACAAGCTATCGTGCCAATAGTGAATGAGGTTCTAGAGGGATTTA ACTGTACTATATTTGCATATGGTCAAACTGGTACCGGGAAAACATACACAATGGAAGGTGAATGTAAAAGGGCAAAGAGTAGGCCCAATGGAGAGCTGCC TGCTGAAGCGGGAGTCATACCTAGGGCTGTTAAACAGATATTTGATACTCTTGAAGGCCAGAATGCCGAATATAGTGTGAAAGTCACTTTCTTAGAGTTG TATAATGAGGAGATTACTGATTTGCTTGTCCTGGAAGATATTTCGAAAGGTGCTTTGGAGGATAAGCAGAAGAAGCAGCTGCCTCTTATGGAGGATGGCA AAGGTGGTGTTCTTGTTCGGGGTTTGGAGGAAGAAATTGTTACAAGTGCAAGTGAAATTTTTACTCTGCTGGAGAGAGGGTCGGCCAAAAGGCGTACTGC AGAAACATTATTGAACAAGCAATCCAGTCGGTCACATTCTTTATTTTCCATTACAATTCACATCAAGGAAACAACCCCAGAAGGTGAAGAACTTATAAAA TGTGGCAAACTGAATTTAGTGGATCTAGCAGGATCCGAAAATATATCCCGTTCTGGTGCTAGAGAGGGCCGTGCAAGAGAAGCTGGAGAAATTAATAAAA GTTTGCTCACTTTAGGGCGAGTGATCTGTGCACTTGTAGAGCACCTTGGCCACATCCCATACAGGGATAGCAAGTTGACCCGTTTACTGCGTGATTCACT TGGTGGGAGGACAAAGACGTGTATCATAGCAACCGTTTCTCCAGCAGTTCATTGCTTAGAGGAGACCTTGAACACATTGGATTATGCACACAGGGCGAAG AACATAAAAAATAAGCCCGAGGTTAACCAAAAAATGATGAAATCAACTCTTATTAAGGATCTTTATGGTGAAATTGAACGCCTTAAGGCAGAGGTTTACG CTGCACGTGAGAAAGTTGGCATCTATATACCAAAAGAGAGATACCTGCAGGAGGAGAATGAGAGGAAGGCAATGGCAGATCAGATTGAGCAGATGGGGAT CACATTAGAAAATCGTCAGAAGCATATTGATGATTTGCAAAGGAGATATGTTGATCAGGTCCGACAGTGCTTAGATTTGAGCACAAAACTTGATGACACT GAGAAAAATTTGAGCAAGACTAGCAAATTGCTTGCCGACAAAGAGGAAGAGTTAAGGAAATGCTGGTATAGCTTGAAAGAGAAAGATTTCATCATATCTG AGCAGAGAAAAGCAGAAAATGCCTTAACTCATCAAGCATGCATTTTACGAGCTGATTTGGAGAGAGCTCTCCAGGATAATGCTTCATTGTTTATGAAAAT TGGCAGAGAAGATAAACTAAATTCCTGCAACAGAGCTGTTGTGGATAATTTTCAAATAGAGATTGCTCAACAAGTTGGTTCTCTCTGCAACACTGTGTCG ACATCATTGTCTCGGCAGCATGATCACCTCGAATGTGTGGAGAATCTTTGTCATTCATTTTTAGGCATTCATGATAAGGCAGCTGTTGATTTGAAAAAGA AAGTCACAACTTTGAGAAATTTGTATATATCCCATATGGAGGCAGTGCAAAATGTTGTCCGATTGCATAAGGCGGACTCTGATACTACATTTGAGGAAAT ATCATCTTTTATATCATCCAATAGACACTCTATCGAGGAACTTCTTGCATCTGAGGCCGCTGAAGCAAGCTCAATATTTGATGATCTTCAGAGTTCTCTC TCAACCCACCAAGGTGAATTGTCAACTTTTGCAAGGGAACTACGCCATAGATTCAATGTCAGTGCTGAACAAATAAGCGATATATCTGATTGCACTCAAG AGTTTGTGGACAAGCTTTTGGAAGAAGCAAAAAGGCTTGACAACTTTGCAACAGAGGCTAATGAAATGCAAATGAAGAGCATTGCCAAGTTTAAAGAAGC TTACGAGGAGCAGGCAAAATCTGATACAGAAAAACTTATTGCTGATATGTCTAGTTTAGTTTCAAACCACATTCGTCGTCAAATGGATCTGGTAGATGAA AAGCTTGTTGATCTTAGAGAAAGTGGCATTGCAAGCAAGTCATTGTTAGATGCTCATGTTTCATCAATGGGTGATATTGTTTCCCTTGCACAAAGGAAAT GGCAGGCCTTTTGCACACTAGCAGACAAAGATAACAGAGACACCGCTGATTTTTCTGCAGTAAAACATTGTCATATGGAGGCACTATTGCAGCAAAGTTT CAATACTGCTGAATCAGCCTTCAAACATATAAGGAGGACACATGAAGCTGTAAATGAGATTGAGACTAAACATATTTCTGCAGCAGTGTTACTTATCAGG AATGCTTTTGATTGCAATGTGCAACATGATATTGAGGTTCATTCTGCTCGGGTTGCAGCCGAGAAAGATGTGGCAAAGAACTGTGAGAATGTCCTTCAAC AGTTTGATGACATGTCTGTAGAGGAGCGGGAATCCATATCCGGCATGTTAAATGTTGTCAAAACTCATGCAAATACACTTGAGACCTTCCGAGGGGATCA CTCAAGTCAAGCAGCTTCCATCGAAGAGAAAGCACGTGAAACTTTTCAGCAACAGTATATGGACTACGAACCAAGTGGGGATACACCAGTAAAATGTGAG ACTGATGTTCCGACTAAGGGGACAATAGAGTCCTTTCGATCCACGCCAATGGAAACTCTCATTCAAGAATTCCGTGAAAATTATTCCGATGAACCTTTTG ATGTAAAAGACTTGAAACCATCACTAATACCTCGTCCTCCCCTCGGCCAAGTAAATTAAAGACGGTGGCGACTTGCTTGCTCATTCTTGTCTTTCACGGT ACGAATTTGTATCTGTAACATCATTGTTGTTACTTGTTACCATTTATTGTTGGCTGCGAGCATGCATCATCATGGGTAAAGTTTAATGTCAACTTTAGAC TGAACAACACCTCCAAACCCCACCTTGGGGTTTAGCCACATCTTAAATAATCTGAAAGTTTTTGCAAGTGCATGTTATTTGTTCTTTGTTTATAATTCTT CTGGAAATTACCTCTTGTAATGATTCAAACACTACAGTAAGGGGACCCTGATTGGGGATCTTCACAGCTCAAAGGAAAAGAACTAGTTTTTGTTATTCTG AATTTATTTGAAGCACCTTTTCGGGTACAGAATCATCAAATTAGCCAATGTTTTGTTTACCCTTTGCTTGATTGGAGTAATTATGGTAAGAGGATTTGAC GAGAGAATGGATGGATTTTAGGATATCCCTTTTTGCATAGAGGGGAAAGAGAAAATTGAGACCTACAGAAAATTTTCTTTGTATTTTTTAGAAGGGAAAA TGATATATCCTCATACTAAATCCTCCTACTAATCATC
• Tissue: pods
• Gene name: LI_gene_163964;
• Additional information: details;

Expression of Ll_transcript_421161

FPKM

• PAB: 0
• PNAB: 3.6
• PS1: 2.1
• PS2: 1
• PS3: 1.6
• PW1: 1.4
• PW2: 0.9
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_421161

• Blastp: Kinesin-like protein KIN-5C from Nicotiana with 71.39% of identity
• Blastx: Kinesin-like protein KIN-5C from Nicotiana with 71.39% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (107774014)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019442993.1)
• Pfam: Microtubule binding (PF16796.4)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;