Id Trinity | TRINITY_DN48791_c0_g2_i2 |
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Name Transcript | Ll_transcript_419991 |
Sequence | GCTAAATCCTAAAGAGAATAGTTTGATGAAAAAACAAAAAGTAATAGCAACAGATAGTTACAGTAAAATGTGAATGTGAGTATAAGAGACAAAAACAAAA AGTTTTGGTTGCGTGGTATTGTATGAGTGTATTGCTTCTTCTCTTTCTGTCTTTGGTCCAACACCAACACCCAACCCCAACCCACGACAACAACATAGAA CGGTGCCGCCTTACTTCACCATCTCTCCAAAATCTAACGTTAATTTCCACTCAAACAATCCAAACCCATCTCATCATTTGGCCCATAAACCCCGTTCTAT ATTCCATTCCCCATCTCAGATCCAAACATTCAAACACTCTCTCGTGTTCTTCATTTTCATGAATTGGAATGCGAGTTTTCCTTAATTGTCAAAGCCAGCG TTAGATTTTGAAGAAACAACGAAAGATGGTTGGAGGAAGAGTTGTGAAAGTGAAGAGAGATACGCTACGAGCATGCATGACATGCCCTCTTTGTCATAAA CTCTTCAAATATCCTACTACTATCTCTCTCTGTCTTCATACCTGTTTGTTTCTCTTTCTCACTTCTTTTTTATCTCTTTTCTCAATTGGGTTTTCATCTT TCTTCTTTTCTCTTTCACATTTTCACGTCCAATTAGTTACATCCATTTTTTAGTGATTTGGTATTTCAGTTTTCAGTTTAATTCCTCTATTCTTTCTTGT CACTGTGTTGGGTGATTCATGATTTGCATTTTCTGTCCCTGTTCCTACCAAAAAAATAATCTTTCTATTCAACATGTTACAGGACTCTGGTCTTAATTAT ATTTTGATATAAGGATTTTGTGACTTTTTTGTTACCATGATAAGAATGTTCAACTGTTTTTTTTTGTTACAGTACGTGGAGCAATACAAGTACTTTCCTT TTATGTGATTTATTGGTTGTTTTGATTTATGTGATTCTGTCTTATTTCATTTTGCTGCCATAGTTTAGACTATAGTTATGGAGCTTATTTTGGTCTTGCC CATTTAAGGTGGTACACTGTGTTATGGAATTTCTTAAGGAAGTGCAGATGTAGTTGAATTTCATGTTTATTTTATAATACTGCTATCACATTATATTTAC TTGTTGCATTCTTGAATTATACACATATACAATGTATTGAGCAATGAATCCGGAACCAGTTTGCAGGAAGTGCATATACGAGAAATTCTCGGATGACGAG GTGGATTGCTGTCCAGTGTGCAACATTGATCTGGGCTGCCTTCCAGCGGAAAAACTCAGGCCAGACCATAATTTGCAAGACATAAGGGCAAAAATATTCC CTTTTAAAAAGAAAAATATTAAGACTCCAGAAGTTTTGTCTTCAATATCCCTGCCTGCAAAGAGGAAGGAAAGGTCGCTCTCATCATTGGTGGTTAGTGC TCCGAAAGTTTCGATGCAAAGTGGCTTTACTGGAAAGAGAACAAAAACCAGTACAAGAAAGGCTACTGCTTTACGTGGATGCAGTTTTATTCTTGAAGAA ACCATAAAGAAGGAAGCAACGTGTGAAGATAATATGGATTCTTCTGTGGCTGAACCTTCTAAAAAACATAAGCCTGGTGAAGATATAGAGGACAGTGTAG AACTTACAGAAGGGAAGGCTGATTTATGGACACCATTGAACTGTCTTGTTGAAGCTGCCAATAGAACAAAGTCCTATAGGTCAAATTCACATGCAACTCC TTCTTCCAAACTAGATTCTCCAACTACCCCTTGTGGTGATGTTGATATGTCTACAAATGCAAACAAACCGGAGCTACCGGCTTCTGTCCAGAGTGAATTA AGCATTTCTAAAACCAAAAATAAGGATAACGGACATAAAACAAAATTTGGAGATGACAAGGATGGAAGCAGCTTGCCCTCAAGACCAGTGAAGCGAAAGA GGTTGCGTCCTGCCGGCCAGAAAAGAGTTGAAGCATCTGAGATGTCTGCGTCAGCCCAAGTCGTGCTAGATGCTTCAAATGGAAAATACAACAGAAAAAA CAGTCCCATTTGGTTTTCATTAGTTGCTTCAGACGACCAGAAAGGAGATTTTCCACTGCCACAGATCTCAGCATGTTACTTGAGAATAAAGGATGGCACT GTACCTGTCTCGTTTATTCAAAAGTACCTTGTTAAGAAACTTAATCTGGCCAATGAAGCAGAGGTGGAAATAATGTGCCGTGGTCAGCCAGTTCTCCCAT CTCTGCAACTGCATAACTTAGTAGATCTATGGTTCCGGGCTGCATCAACCTCAAAAAAGATACCGGCATCCGTGGGGTCCTCGGCTAAGGATTTTGTGAT GGTTTTATCATATTGTAGAAAGCCCTTGCCTACTTGAGAATCTGAGATTGTCCCCTATTACATTTACATCATTTTATCCTCAATACTTTACATACATGTT CAACTTGTTTTTATAACATTGTCACTGAGATTCCTGCATAGGAATGTGTTCATTTAATTCCTAACATTTGATGAATCTATTTGAGTTTGTTTTGCTAATG ACCTGAAAACGTGCACCCTCCAATTTTATTGCATCTGCTTTGTTTGGTGTTATTCTTAGAAACATTTGTTATTTATTGTTGATTCGATCATGTCTGCC BLAST |
Tissue | pods |
Gene name | LI_gene_163988; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_419991
Blastp | E3 ubiquitin protein ligase DRIP2 from Arabidopsis with 45.32% of identity |
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Blastx | E3 ubiquitin protein ligase DRIP2 from Arabidopsis with 45.32% of identity |
Eggnog | Polycomb group ring finger(ENOG410XPCN) |
Kegg | Link to kegg annotations (AT2G30580) |
CantataDB | Link to cantataDB annotations (CNT0002431) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019453410.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |