| Id Trinity | TRINITY_DN48799_c3_g1_i12 |
|---|---|
| Name Transcript | Ll_transcript_421416 |
| Sequence | CACAAACTCTTTTTCAGAATGAAAAACTTTGGAATTTGAAAGTCTGGGTGAAATGGAAGATCAAAAGCAGAAGAAACCCAGAATCCTCTGCCTCCACGGA TTCAGGACAAGTGGTGAAATCCTCAAGAAATCAGTGTTACGTTGGCCTGAGATTGTAACAGAAAAACTGGACTTAGTCTTTCTTGATGGGAAGTTTCGAG CACAGGGAAAATCAGACGTTGAAGGCATTTTTGATCCTCCTTACTATGAATGGTTCCAACCTAAAAAGGATTTCACCGTGTATAGCAACTTTGAAGAAAG TGTAGCATACATTGAAGATTACATGCTGAAAAATGGTCCTTTTGATGGTTTGCTAGGATTCTCTCAAGGAGCAATGATAGCAGCTGCATTGTCAGGAATG CAAGCTCAGGGCGTAGCACTTGGGAAGGTAGACAAGATCAAATTCTTGATTATAATAGCAGGGGGCAAATTTGGTGGAAAGAAGTTTGGAATGCCAAAAC TTGCTTCCAAGGCATTTTCAAAACCAATTGATTGCCCCTCTATCCATTTCATAGGGGAAAGAGATTCTATGAAGCCAGAGAGTATTGCTTTGTTGGAAGC ATTTGTGGATCCCACTGTTATTTATCACCCAAAAGGGCATATAATCCCCACGCTTGGTTAGTAGTAATTATATATCTATTAAATATTTTATCAATGTTGT ATAAACTAGAATAAAAATTTATCGTCCCAAATCATATATGCACCAATAATAATAAAGCAAAAATAATAAAATAATAAAATTTTAATTGATATAATATATT ATTGTTGATACACACAAGATTTAGGATATGATTTCAAATAAAATCTTTTTTGATATATACGTACCTACCTTTAATTCACTTCACACATGTATACTTTTTT TTATCATCATTTGATTGAAGTTAAATTACCTTATTTTATCATCGAGTCAAATGCTCCAATATAAATGGAGTCATAAACTCTGTCCCAAACCTTATCCCAA ACGAATAATAACATGTCATATCAGTTAAAAATATTAAATATTCATTTTTTATTTTTTTTTTTCTGGTCCAAACACAAATATGAAATATTGTTCATTGATA AGTTAAGGTAGGAACAAGAATCATAGTTCAAAATGTTGCACTCTCACTACCACCACCACCACCTTCTGTTATTAACCCAACACCATTATTCTCCTCTCTC TAATTCTTCACCATCACTTCTTCATTTTCTTCACAAACCCACAACAACTCTTCACACTGTTTCAGCCATTCCTTCAGCAACTTTACCATGGCTAACACAC CTGGCCCAAGTCACCAATGAAACAGAGGAGGGTCCTATCAAATTTCTCCCATTTTTTACTTCCATTATTGACACCATAGATGACCCTGCTATACTCCAAG TTGCTTCTACCGTTATTCTCACTGCAATCATCACTGCCTTTTTTCGGTCTCGCTGGCGCCGTGCTAAACGTGCCCAAGAATTGAAAATCAGGTTGTCTGG AGCGAAGAAGTCATTCGATAGCGCGAAAGGAATGGGGTCGAGTTCCATTAAAGCTAAGTCTAAGAAGCGTCGGCGTTCACCTGACCAGACATTGTTGGGA GCAGCTATAGCAGGTGTTATTGCTGTTCTTCTCTTTAAGTTCACCATATCCGTTGACGCAGGGTTCAATCGCCAAGGACTTTCAGATAATTTCTCTGTAA GGCAGGCAACACTCACAATAAGGACAATCATAATTGACTTGTGCTTCTTTGCTACATTTGTTTATGGAATCTGTTCTATTGGACTATTACTTTATTCTGG TGAGCTTGCCCTCAATATCTTTTTGGGAAGGCCAAACATAAAAGGAACTCAAAGCAAAATAACTGAGCAATCAGGCTTATCAAATTCATCAGAGACTCTC AACAGTAACAATGAATTGGCCAGCACCAAGGAAGATCAAAGTTCAAAAAATTCATAATGATTGAAGTCCAGTTCTGAAGTTATATCTAATTATATTAGGA ACTATATGGGTAATTATATAAGGATTTGTTATATCATTATATGTAATTATTTTAGGATTATATTTCTCCTTTGTCATTACTCATTAACCTATAAATATTA CCAACATTTTGCACTTTCGAGATACCAAAAAATATATACA BLAST |
| Tissue | pods |
| Gene name | LI_gene_164025; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_421416
| Blastp | Rhodanese-like domain-containing protein 6 from Arabidopsis with 32.02% of identity |
|---|---|
| Blastx | Rhodanese-like domain-containing protein 6 from Arabidopsis with 31.58% of identity |
| Eggnog | ovarian cancer-associated gene 2 protein(ENOG4111JYH) |
| Kegg | Link to kegg annotations (AT1G09280) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019450018.1) |
| Pfam | Serine hydrolase (FSH1) (PF03959.12) |
| Rfam | - |
| GO | - |