| Id Trinity | TRINITY_DN48799_c3_g1_i14 |
|---|---|
| Name Transcript | Ll_transcript_421422 |
| Sequence | CACAAACTCTTTTTCAGAATGAAAAACTTTGGAATTTGAAAGTCTGGGTGAAATGGAAGATCAAAAGCAGAAGAAACCCAGAATCCTCTGCCTCCACGGA TTCAGGACAAGTGGTGAAATCCTCAAGAAATCAGTGTTACGTTGGCCTGAGATTGTAACAGAAAAACTGGACTTAGTCTTTCTTGATGGGAAGTTTCGAG CACAGGGAAAATCAGACGTTGAAGGCATTTTTGATCCTCCTTACTATGAATGGTTCCAACCTAAAAAGGATTTCACCGTGTATAGCAACTTTGAAGAAAG TGTAGCATACATTGAAGATTACATGCTGAAAAATGGTCCTTTTGATGGTTTGCTAGGATTCTCTCAAGGAGCAATGATAGCAGCTGCATTGTCAGGAATG CAAGCTCAGGTAATAAGAAAGGAAATCATCATAGTTATTTTGATTTAGTCGATAAATCTTTCAACTATTTTATGATTTTAATTTGATGAAAATGAGTGAT GAATGAATTTAGGGCGTAGCACTTGGGAAGGTAGACAAGATCAAATTCTTGATTATAATAGCAGGGGGCAAATTTGGTGGAAAGAAGTTTGGAATGCCAA AACTTGCTTCCAAGGCATTTTCAAAACCAATTGATTGCCCCTCTATCCATTTCATAGGTAATATCGAGGAATAAGTTTCTTACGCCTTTGTTTGAGTAAT TCTTTTTCTACCGGTTAGCCTTGTAAAGTTGAATTTCACATCTTATATTAAATGTTAGGAAATCCGATACTTTTTTAACTTACTCTACTTTTTAGTAATC AATTCAAAAAAAAAATCTAATTTTTTATTTGAATTTATGAATAGATATAAACTATTTGATTTTTCTAAAATAAATGACTAATATATGAAGTTTTTTAAAC ATATTTTTAGAATAGCTGCATCTCATTTCTTAATTGTTATGAATCTTACGATAGTATTGAACTAATTGATATACTTTGTCCATATTATGTGGTGAAGGGG AAAGAGATTCTATGAAGCCAGAGAGTATTGCTTTGTTGGAAGCATTTGTGGATCCCACTGTTATTTATCACCCAAAAGGGCATATAATCCCCACGCTTGA TGACAAGAGCCTGAAAACTATGCTTGGCTTCATTGATGAGATTCAGAGAATGGTATCAGAGGATAACCAAAAGGCCTTAATCCGTAAGGGTATGAAGGCG TTGATATCATTTTTATGAATCTTCAACCAATCCTTATATATAATAACCTCATGTAAACTCTCTGAAGGTTGGTATTTGGATTTATGGGGAAACAATTAGG GATGGAAAGAAATGAGACACAAATAGAAAATAAATTTGGGATTTGGAAGAATAATGGAATTTATTTATTTTTATTTCATTCATATTCGGGGTGTAATTGA ATAAGGTAATATTTATTTATGAATTATCTATATTATTATTATTATCTCATTAATTCAAATTATTGGATTTCCCTAAAGTTGATGGTTAGGATGAAGAGTA AGTCTAAAAGAGTTACTCTTGGAGTAACTTGATCCCTCCCCTATTTTTTTAAACTATTATTTTGGTTGTGTCATGTATTTTATTATAATTAGTGCAATAT CATTATTATGACATGTATTTTACTGTCACGTAGCATGTGTTTTATTTTCTTCAAATGAGCAATTCTGAATAAAGTTATACTCCACTGTTATGCTAATAAA CAGTTAAACACAATGCCTTCTCTGGAAAAGTTGGATTATGAAATAGGAATGACAGTCTTTTAGCTGAACTTAGCCTATTTGGAAATTTAATAGACACTTT ATACTGGTAGCCATATCATTATTTGCTAATCACTTATTTTTTCGAACCTGGGAAGTTTACTGATTACTTAAATCACTTCCGTTTAGTGGAGCTTGAACCT GGTACCTGGAGTAAACTTTTACCAGCAGCCACCTGGAAACATAGTGCTTCATTAATTTCTTTTGTTTTTTCTTTATCTTTGCTCGTGTAAATTCCTTTGG CACAATACTTTAGGCAACATGGGACAAATTGACTATATCTAATTATCTGGTCATCTTGTTTCATAAATTAGATACACAGTCAGCTGTCGTACAGACCGGA CAAGATGCATTTTCCTTCCTGCTTCCCCTTCCACCACATTCTTCTACTGTTTATAATTTGTCATTGTCTTGTAGTTAACTATACTGATTTTTTTTTACAG TTTTACCTCGAGCATTTCATTAAATGTGATTGTTGAACTCTTCTAATTTTTTAATTTCTCACTGTATGCTGAGAATGGCATAGATTAATAATGCTGGGTC AAATGCATATAGCTATAAGCCACTTGCTGAGGCTTCAGATGAAGATCTTATTGAAGTTGTTACAACAAATACACTTGGTTTGATGATATGTTGTCGTGAG GCAATGAAGATGATGGCGAGTCAGCCTCGTGGGGGTCATATTTTCAATATTGATGGAGCAGGTTCTGATGGAAGACCAACTCCCAGGTTTGCTGCATATG GAGCAACAAAGAGAAGTGTGGTGCATTTAACAAAGTCATTACAGGCAGAATTGCAGATGCAAGACGTTAAAAATGTCATGGTGCATAATCTTTCGCCAGG AATGGTAACAACAGATCTTCTCATGTCTGGTGCTAATACAAAGCAGGCAAAGTTTTTCATCAATGTCTTGGCTGAACCACCCGAAGTGGTTGCTGAATAC TTAGTTCCAAACATTAGATCTATCCTTGCCAATGGATCAATGAAGCCAACTTACATTCGCTTCCTCACTGGTTTCAAAGCATATTCCCAAATATTTTCAA GATTTGCATTTGGGGCAAGAAGGAACCGGTACATACTTGAAGATTGAACAGCATAACAACATGTGCAATTTTTGGTCTTGTATATTTTCCCCTTTAGTGA AGCTGTAATCTGCACGTTTGAGAATATACATGGGTAATAATAAAGCAAGTTCTTTAGCTGAAATGTGC BLAST |
| Tissue | pods |
| Gene name | LI_gene_164025; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_421422
| Blastp | Chlorophyll(ide) b reductase NOL, chloroplastic from Arabidopsis with 87.01% of identity |
|---|---|
| Blastx | Chlorophyll(ide) b reductase NOL, chloroplastic from Arabidopsis with 88.24% of identity |
| Eggnog | serine 3-dehydrogenase activity(COG4221) |
| Kegg | Link to kegg annotations (AT5G04900) |
| CantataDB | Link to cantataDB annotations (CNT0000254) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449362.1) |
| Pfam | short chain dehydrogenase (PF00106.24) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |