Id Trinity | TRINITY_DN48807_c3_g1_i3 |
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Name Transcript | Ll_transcript_284789 |
Sequence | GGCCTGTCTTTATGGGCCTAAGCCCGTTACTATTAACATTTAACAACAACATCTCTCTCTCTTTCAATTACGCCATGGATATTGAAGACGAGGACCGACA ATTTGAGCCTCCACCTCCCGCCACCGCCACCGCCGTCTCCGAAACCCACATCCTTGTTAAACCAGAGCCTCATCCCGACGACCACCACCAACCTCCTTCC GATGCCTCCGGAGAACCAAACAAATCCCCAAAACGCTCCCTCGGTGACGAACATGAAGAGCCACTTCCGAAGAAGCACAAAGATCTTTCATCTCCCACCG TCGACGGCGAATCTCCATCGCCCGATGCCGTTATCAACAATAACGGTTCTGTCAATGCTGCTATTACATTGCCGATAATCACGTCCAGTTCCAATTCCAA GAAGTCGAAGAAGAAGAACACCAACATGTGGGCGACGAAATCGAAGAAAGGGAAGAAGAAGAAGAAGAGTAAGGTCAACAACAACAACAACAACAACAAC AACCCCAAAAGAGAAGACACGGTGCTCATAACACCTGTCCAGAGGTTCCCGGACAAGAGCGACGACATTCCGGAGATGAAAATCTGCTTATCGAAGGTGT ACAAAGCAGAGAAAGTGGAATTGAGCGATGATAGAATGAGTGCAGGGAGCACCAAGGGTTATAGAATGGTCAGGGCAACCAGAGGGGTTGTGGAAGGGGC GTGGTACTTTGAGATCAAGGTTCTCAAATTGGGTGAAACGGGTCACACTCGTTTGGGTTGGTCCACCGAGAAGGGTGATTTGCAAGCACCGGTTGGGTTT GATGGGAATAGTTTTGGGTATAGGGATATTGATGGGAGTAAGATACATAAGGCTTTGAGAGAGAAGTATGGAGAGGATGGGTACAAGGAAGGTGATGTTA TTGGATTCTATATCAATTTACCCGATGGAGATAAACATGCACCAAAAGCACCACATTTGGTTTGGTATAAAGGCCAAAGATATGTTCATGCTCAAGATGC TAAGGAAGATCCAGAAAAACTAGTGCCTGGAAGTGAGATATCATTCTTTAAAAATGGTGTATGCCAAGGTGTAGCTTTCAAGGATCTTTATGGTGGTCGT TATTACCCTGCTGCTTCAATGTATACTCTCCCCAATGAGCCAAACTGCACAGTCAAGTTCAACTTTGGCCCTGACTTTGAATTCTTTCCTGAGGATTTCA ATGACCGGCCGATTCCCAAGCCAATGATTGAAGTTCCTTATCATGGTTTTGACAACCGGGTTGAAAATGGAGAGTCTACTGATATGAAATCCTCGAAAGA GTGATGTAGGTTGCTATTATATAGTATATGTGCTGCACAGATGAGTGAGTTCATATTCGGCTGTAATTCTAGTGATTTAAATCGACTCAAATGACTAAAT TAGTGGGGTAAACTTCTAAACGAGAAAATTGTCCATGTGAAATACATAAGATTTCATTGATCCAATCAGATAAGTTGTATTTTCTTTGGCGTTATTTCTC CATATTTTTGCTATCAGTTGTATGTATTACATCCAGTGTCAGTATGCAATGTGGGTCATGCATGACTCCTTTTATATAGGCAATCTAGATACACAGTGAT TGGTTGTATATTGGCAATCTTGGAGTTCATTTGGCGCCAAACCTTGGCCAATATCAAGGGAAATTCAACCCCAGCTTTATTTTGGCTCAATATTTTACTT TTTGTGGTATAATGTAGACATATGGATCAAATGTATATATAGCGTCTGGATATACAGTGTTTGGTCTTTTCATACAGCATGACATCTTTAGATAGCCCTT TTGGATTGGGACTAAAATAAAGAGTGCAAAGTGCATGTATCAAACTACATATAACATTCGGATATGATGTGTAATTCTTTTGTTTTCGGATCAGCAAATG ATGCTTCCATGTTCTGATGAATAGGGGAGTTGAAACCCTCTTGAGAAGACAGTGGATGCAGTGATTGGTGCCTCTTGGAAGGGAAAGATGGTACCACATT CCTGAATGAAGGTCGCTTCTTGATGTGTTGCAGAGCTTGCTTGGCATAGATACTACGAAGTAAAGGTGAAGCTCTCTCCTTAAATTTAAGAACGAAAAAG AAAAGAACTCTAAGCAATATGAGGATGACTATGACTGCAGCTAAGTCCCACCATTTAGAATAATCAACTCGCATCCCAAGCATGGTTGTGAGGATGATTT CTCCTTCCAGTTTTGGGCCACCAGGTATTAATGGATCAAACTCCAGCCCAATCAAGTCATTTTTGAAAGCTCCCTGCATCAGAATCAGTAGTCGATACGT TCATCAATGGTGCCGTTGATTTTGGTTCCTATATTCAAATTATGTTGAGAGAAGGTGGAAAGTCGCAGTAGTAATTTTCCAGATAGCTAGGTATCAAAAA AGTTGTGAATGTATGCAGCAAACTTTGAAGAAATACATACATGCATTCTCTGGAAGGCCATCATAGTGTCAAAGTCTGAATTAATACAACGGAGGAAATG ATCAGAAGGGTTTCTTCTACTTGGACAAGGGAATCCTGCTTTGGCAAAGAACTGCAAATGCATGAATGAATTATATATATCAGGGTTAACTTATTAAGCT TTCAAACACATGGTTTGTTATAGCTAAACACGACCATTTGCACTGAGGTTAAGCAAAAACAACATTTGTGAGCAATATTTCGTTCATATTAGGCTTATTT ACTGATTCTAACAAGTGATAAAGTCATAAGTTCATTGTATTTGTTACATGCGTAAAGGATTTTATTTCAACTTTTTAATCTCTAATCCCTTATGATAAGT AATCAGACTATACATATATTTTAAATTTGAGCATGCATCTTCTCTCAAA BLAST |
Tissue | pods |
Gene name | LI_gene_164101; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_284789
Blastp | Protein TRAUCO from Arabidopsis with 75.17% of identity |
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Blastx | Protein TRAUCO from Arabidopsis with 79.23% of identity |
Eggnog | ash2 (absent, small, or homeotic)-like (Drosophila)(ENOG410Y5GC) |
Kegg | Link to kegg annotations (AT1G51450) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019450554.1) |
Pfam | SPRY domain (PF00622.27) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |