Ll_transcript_286800

• Id Trinity: TRINITY_DN48821_c8_g2_i5
• Name Transcript: Ll_transcript_286800
• Sequence: CAAAAAACACAGTCTCATTGGAGGTAAGAAGATGAGGAGGAATGGCAGGCTGACAGTAAACGACGACGTGGAGTAAGATTAACATTCACAGAAATGTCGA AGCTTCTTCTACTTCCATCCACTCCTCACCTCACCTCTTTCCAACGCTCCCACTCACTCTCCTTTTCTTCTCCCATTCCATTCCAATCTCATTTCTCTCA CACCTTTCCTAGACACCTTTCCCTTCGTACCTTAAATTCCTCTTCTTCCTTTTCTTCTTCTTCCTCTGACCCTAAAACTAAGGAAGAAGAAGAAACTGAC ATTAACAATCTAAGTGATGAGGATTATCCAAGCGGTGAGTTTGAATTTGAACCTATAACGGGATGGAGAAACTTTCTTGTTAAACTCAAGATGCTCGTTG CGTTACCCTGGGAGCGCGTTCGCAAGGGCAGCGTCCTCACTATGAAGCTGCGTGGCCAGATATCTGATCAAGTGAAGAGTAGGTTCTCTCCGGGACTTTC TCTACCTCAAATTTGTGAGAATTTTTTGAAAGCAGCATATGATCCTCGCATTTCTGGGATCTATCTCCATATTGACAGTTTAAATTGCGGATGGGGTAAA GTGGAAGAAATTAGAAGGCACATATTGAATTTCAAAAAGTCAGGAAAATTTGTTGTGGCTTATGTCCCTACATGTCAAGAAAAAGAATATTACCTCGCGT GTGCATGTGAAGAGATATATGCCCCTCCAAGTGCTTACTTTTCTTTGTTTGGATTGACCGTTCAAGCTTCATTTTTAAGAGGTGTTTTAGAAAATATAGG AATTGAACCACAGGTGGAAAGGATTGGCAAATACAAAAGTGCAGGGGATCAACTAGCTCGAAGAACCATGTCCGAGGAAAATTGTGAGATGCTCACTGCT TTGCTTGATAGCATTTATACAAATTGGTTGGATAAAGTCTCTTCTGCCAAAGGAAAGAGTAAAGAAGATATCGAAAACTTCATAAATGAAGGCATCTACC AAGTAGACAAGCTCAAAGAAGAGGGCTTCATATCAAACATAATCTATGATGATGAGGTCATTGCCCTATTGAAGGAAAGACTTGGAGTGAAAATAGATAA AAAACTGCCTATGGTGGATTACAGGAAATACTCTCGAGTTAGGAAATGGACAGTTGGGATATCAGGTGGTAAAGATCTGATAGCCATCATCCGAGCTTCA GGAAGCATTAGTCGTGTTGAGAGTCAATTAAGTGTTTCTAGCTCAGGTATCATTGCAGAGAAGCTCATTGAGAAGATTCGAAGTGTTAGAGAGTCAAAAA AAGTATAAAGCTGCTATCATCCGAATTGACAGTCCTGGAGGTGATGCCCTTGCTTCTGATTTGATGTGGAGAGAAATCCGGCTTTTGGCTGCTTCAAAAC CAGTCATTGCTTCAATGTCTGATGTGGCAGCAAGTGGAGGCTACTACATGGCAATGGCAGCAGAAGCTATTGTCGCAGAAAGTCTTACCTTAACTGGTTC TATTGGTGTGGTTACAGGAAAATTTAATCTTGGGAAACTGTATGAGAAGATTGGCTTTAACAAAGAAACAATATCAAGGGGAAGATATGCAGAGCTCTTT GCTGCTGAACAACGTCCTTTTAGGTAATATTATTTCTTCATTTTTCTACTATGAAGTTTCTAGAAAACCATGAGAGAATGTTAATCAGTATAATATGCCA TTTGATATCTCAACTGCAGATATTAGTGTTACTTTCTAAGAGGTTACCTATCCAACTCAAATATGCTGATATTGTCATGATGACTTTCTGTAAATGCTTA AAACAAAAAGCAACAAATGAACTTAAATAAATGAAATCCAGTTTCTAACATTTGAAGGGGTTTACTTGATGCTTCGGGCTTACTGCTTATGATTCATACA ACTTTCGCTTTTCTTCCTTACCTATATTTTTGGTGAACAAAAAGAGGGTATTCAGAAAACGGTTATGCAGTACTACTGATCAACATGCGTGAGAACCAGA ACAGTGGGTAGAGGTTCACTTAGAGGATTATCTCCAGGGTGTTCCATCAATCTATAAAGCACCAATAATGATACCAGTATCCGTTATGATATGCATCTAA TACGGTAATATGCTATTTTTTGAAAGAATATAGGATATAATAGGTTTAGGATACACATATAAAATATGCGTATAAAATTCATATAAAGGGGAATAAGTTG GTTAGAAAGTGCATCAACAGAAGAATCTACCCATTGTGGGACTCTACTTTTTCTCAATTCACTCAAAATAGAATTTATCTGACTTTTTTTTTCAATTCAC TAAAAAGTATAATCTACCTAATGTAGGACTTCTTATTTTTTGAATTTCACTGTATGTTCCAACACTTATTGCATACAAATAGTATTGGTCTCATTGAATT CTTCATCGTCATTAGGGTGAGTCTTATAAATCAATGTAAATGTTTTTCAAACAGTCGAAGAAAGAATAACGAAAAATTGTCTCACGCAATATATATGTTT AAACTTTTTATCTCTACAATTTCACTTGGTAGATTATGCGCTGTTTCTCTCTCTACACTTATAGTTGGCTGACTGTGTGTTTCCTTTTCTCTCTCTTAAA ATTCTTTTTCATGGTAATTTCAGTGTTTGGAGTGGTATCGAAAAAACATTTTAAGAGCATTAGATGTAAGGATAGTTGAGGGTTTCTACAGCTATTTATG CTCTCCTTAACCTTTAATATTAATTCATGAGCCTTCCAGGGTTGGTGCATTTAGATTTTACTAATGACAGAGACAATTATGAAAGTTTTACTTTTTCTTT CTTGTTTTGATACAGACCAGATGAAGCAGAGCTATTTGCAAAGTCTGCACAGAATGCTTATAAACAATTTCGAGATAAAGCAGCTTTATCCAGATCAATG ACTGTAGATAAAATGGAGGAGGTAGCACAAGGGAGGGTTTGGACTGGTAAAGACGCAGCTTCTGGTGGTTTGGTTGATGCTATTGGTGGGCTTTCAAGAG CTATTGCCATAGCAAAATCAAAGGCCAAAATCCCTCATGATAGAAAGGTTACTCTTGTCGAGATCTCCCGACCCAGCCCTTCTCTACCGGAGATTTTATT AGGTGCCGGGAACACCCTTGCTGGAGTAGACAGAACATTGAAGGAACTGCTGCAGGGCTTGACCTTTGGTGATGGAGTTCAAGCCCGGATGGATGGGATC ATGTTTCAAACATTGGAAGGATATCCTAACGCCAACCCCATTCTGTTAATAATTAAAGACTACCTTAGTTCTTTGTAGTTCTTTATAATTCATAAGAATC ATTTTATTTCTATTTTCAATGTAAAGCTTGAAAATTTCAATGTATTACAGTCCCAAATCCTCTTGGATTAAATGTAAGAATATGATGAAAAAATTGTTTT TGCATATAGATCTATTCCTTGGGATTTCAACCTCAAAA
• Tissue: pods
• Gene name: LI_gene_164214;
• Additional information: details;

Expression of Ll_transcript_286800

FPKM

• PAB: 0.2
• PNAB: 0.5
• PS1: 0.2
• PS2: 0.1
• PS3: 0.1
• PW1: 0.4
• PW2: 0.1
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_286800

• Blastp: Serine protease SPPA, chloroplastic from Arabidopsis with 62.83% of identity
• Blastx: Serine protease SPPA, chloroplastic from Arabidopsis with 65.19% of identity
• Eggnog: Signal peptide peptidase, SppA(COG0616)
• Kegg: Link to kegg annotations (AT1G73990)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019437141.1)
• Pfam: Peptidase family S49 (PF01343.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;