| Id Trinity | TRINITY_DN48821_c8_g2_i7 |
|---|---|
| Name Transcript | Ll_transcript_286805 |
| Sequence | CAAAAAACACAGTCTCATTGGAGGTAAGAAGATGAGGAGGAATGGCAGGCTGACAGTAAACGACGACGTGGAGTAAGTGTAGATTAACATTCACAGAAAT GTCGAAGCTTCTTCTACTTCCATCCACTCCTCACCTCACCTCTTTCCAACGCTCCCACTCACTCTCCTTTTCTTCTCCCATTCCATTCCAATCTCATTTC TCTCACACCTTTCCTAGACACCTTTCCCTTCGTACCTTAAATTCCTCTTCTTCCTTTTCTTCTTCTTCCTCTGACCCTAAAACTAAGGAAGAAGAAGAAA CTGACATTAACAATCTAAGTGATGAGGATTATCCAAGCGGTGAGTTTGAATTTGAACCTATAACGGGATGGAGAAACTTTCTTGTTAAACTCAAGATGCT CGTTGCGTTACCCTGGGAGCGCGTTCGCAAGGGCAGCGTCCTCACTATGAAGCTGCGTGGCCAGATATCTGATCAAGTGAAGAGTAGGTTCTCTCCGGGA CTTTCTCTACCTCAAATTTGTGAGAATTTTTTGAAAGCAGCATATGATCCTCGCATTTCTGGGATCTATCTCCATATTGACAGTTTAAATTGCGGATGGG GTAAAGTGGAAGAAATTAGAAGGCACATATTGAATTTCAAAAAGTCAGGAAAATTTGTTGTGGCTTATGTCCCTACATGTCAAGAAAAAGAATATTACCT CGCGTGTGCATGTGAAGAGATATATGCCCCTCCAAGTGCTTACTTTTCTTTGTTTGGATTGACCGTTCAAGCTTCATTTTTAAGAGGTGTTTTAGAAAAT ATAGGAATTGAACCACAGGTGGAAAGGATTGGCAAATACAAAAGTGCAGGGGATCAACTAGCTCGAAGAACCATGTCCGAGGAAAATTGTGAGATGCTCA CTGCTTTGCTTGATAGCATTTATACAAATTGGTTGGATAAAGTCTCTTCTGCCAAAGGAAAGAGTAAAGAAGATATCGAAAACTTCATAAATGAAGGCAT CTACCAAGTAGACAAGCTCAAAGAAGAGGGCTTCATATCAAACATAATCTATGATGATGAGGTCATTGCCCTATTGAAGGAAAGACTTGGAGTGAAAATA GATAAAAAACTGCCTATGGTGGATTACAGGAAATACTCTCGAGTTAGGAAATGGACAGTTGGGATATCAGGTGGTAAAGATCTGATAGCCATCATCCGAG CTTCAGGAAGCATTAGTCGTGTTGAGAGTCAATTAAGTGTTTCTAGCTCAGGTATCATTGCAGAGAAGCTCATTGAGAAGATTCGAAGTGTTAGAGAGTC AAAAAAGTATAAAGCTGCTATCATCCGAATTGACAGTCCTGGAGGTGATGCCCTTGCTTCTGATTTGATGTGGAGAGAAATCCGGCTTTTGGCTGCTTCA AAACCAGTCATTGCTTCAATGTCTGATGTGGCAGCAAGTGGAGGCTACTACATGGCAATGGCAGCAGAAGCTATTGTCGCAGAAAGTCTTACCTTAACTG GTTCTATTGGTGTGGTTACAGGAAAATTTAATCTTGGGAAACTGTATGAGAAGATTGGCTTTAACAAAGAAACAATATCAAGGGGAAGATATGCAGAGCT CTTTGCTGCTGAACAACGTCCTTTTAGGTAATATTATTTCTTCATTTTTCTACTATGAAGTTTCTAGAAAACCATGAGAGAATGTTAATCAGTATAATAT GCCATTTGATATCTCAACTGCAGATATTAGTGTTACTTTCTAAGAGGTTACCTATCCAACTCAAATATGCTGATATTGTCATGATGACTTTCTGTAAATG CTTAAAACAAAAAGCAACAAATGAACTTAAATAAATGAAATCCAGTTTCTAACATTTGAAGGGGTTTACTTGATGCTTCGGGCTTACTGCTTATGATTCA TACAACTTTCGCTTTTCTTCCTTACCTATATTTTTGGTGAACAAAAAGAGGGTATTCAGAAAACGGTTATGCAGTACTACTGATCAACATGCGTGAGAAC CAGAACAGTGGGTAGAGGTTCACTTAGAGGATTATCTCCAGGGTGTTCCATCAATCTATAAAGCACCAATAATGATACCAGTATCCGTTATGATATGCAT CTAATACGACCAGATGAAGCAGAGCTATTTGCAAAGTCTGCACAGAATGCTTATAAACAATTTCGAGATAAAGCAGCTTTATCCAGATCAATGACTGTAG ATAAAATGGAGGAGGTAGCACAAGGGAGGGTTTGGACTGGTAAAGACGCAGCTTCTGGTGGTTTGGTTGATGCTATTGGTGGGCTTTCAAGAGCTATTGC CATAGCAAAATCAAAGGCCAAAATCCCTCATGATAGAAAGGTTACTCTTGTCGAGATCTCCCGACCCAGCCCTTCTCTACCGGAGATTTTATTAGGTGCC GGGAACACCCTTGCTGGAGTAGACAGAACATTGAAGGAACTGCTGCAGGGCTTGACCTTTGGTGATGGAGTTCAAGCCCGGATGGATGGGATCATGTTTC AAACATTGGAAGGATATCCTAACGCCAACCCCATTCTGTTAATAATTAAAGACTACCTTAGTTCTTTGTAGTTCTTTATAATTCATAAGAATCATTTTAT TTCTATTTTCAATGTAAAGCTTGAAAATTTCAATGTATTACAGTCCCAAATCCTCTTGGATTAAATGTAAGAATATGATGAAAAAATTGTTTTTGCATAT AGATCTATTCCTTGGGATTTCAACCTCAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_164214; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_286805
| Blastp | Serine protease SPPA, chloroplastic from Arabidopsis with 67.56% of identity |
|---|---|
| Blastx | Serine protease SPPA, chloroplastic from Arabidopsis with 70% of identity |
| Eggnog | Signal peptide peptidase, SppA(COG0616) |
| Kegg | Link to kegg annotations (AT1G73990) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019437141.1) |
| Pfam | Peptidase family S49 (PF01343.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |