Id Trinity | TRINITY_DN48822_c1_g1_i4 |
---|---|
Name Transcript | Ll_transcript_285839 |
Sequence | CAATTTTGAACTCAGAATTAATATGTTCTGGAAGATAAGTTCCAGATAGACTATAACATAATCTCTACTAAGCACGACCTTAATATTCCAATCATTCATT ACCTCTATACAAAAATATTTCACTACTAAGCTATACTTTTGCATGCCACGTTTCTTGCTTTGTTTCTCATAAAACTTTTTACATTTTGCATTTCATGAAT TGTTAGAGGGGTTGGGTTACTTCATGGGAAAATGACATTTAGGTATATCTGAGGAAGACTCAACCATAAACTTTACCAACAAAATATTTCATATTTGACA ACCTACGGGTATGTCCTATACTATGTAATATATGCAATATGAATACTAGTTGAGTTCAGCACCATCCTTCTATTGATTGAGTTTTTATCTAAGGATTTAG GACATCATGGATGAGAATATCAGTTCAAACATTGTACCAAAGACCAAGTGCAAATTTCCTCTCACAGTTTTCTTCAAAGATGCAAGACTTATTTTCAAGA TGGATTCCCTTGCTAAGGAGATACTAAGGATTGCATTCCCTTCTGCACTGGCTGTTGCTGCTGATCCCATTGCTTCTCTAATAGACACAGCATTCATAGG CCATTTGGGGCCGGTTGAACTTGCTGCGGCCGGAGTTTCCATTGCTTTGTTCAACCAAGCTTCAAGGATTACCATATTCCCTCTTGTTAGTATTACGACT TCGTTTGTAGCTGAGGAAGATACAATTGAGAAAATCAATATCAAAGCAGCTGAAAAGCAGTTCACTGAAGACCTTAAGGCCATGTCCAATGAAGTAATGC CAGATGATTATTTGCTTCAAGACATAGAAAAATGTGCACCCAAAGAGAATAGTGAGACTGCTAAACAAACTTCGGCTGCGAATGGTGATACAAATGAGCT CATGGCAAAAAAAATTGTATCTGAAAATGTGAAAAGGGATGGTAGATTGAAAATTGAAACAAAATATGGAGATGAGGCCAATACAAATACAAAGAAGTCT TACGCGGATACTACTAGTAGTAATAAGAGCGTGCCAAAAGCAGAAAGGAAGAAGCGACACATTGCTTCAGCGTCAACAGCGCTACTTTTTGGCACAATCC TTGGCCTCCTTCAAGCTGCAACACTTGTATTTGCAGCCAAACCATTATTAGGCGCAATGGGTCTAAAACTTGGATCTCCTATGCTAAACCCTGCAGTAAA GTACTTGAGATTGAGAGCCTTAGGTGCTCCTGCAGTGCTTCTCTCCTTGGCCATGCAAGGAATCTTTCGAGGGTTCAAGGACACAACAACCCCTTTATGT GTCATCGTTTCTGGATATGCATTGAATGTGGCTTTGGACCCTGTCCTAATATTTTACTGCAAATTGGGCATCAAAGGTGCAGCTATTTCACATGTCCTCT CCCAGTACATAATGGCATTGGCCCTCTTCTCGATCTTAATGCGAAAAGTAGACCTCCTACCTCCAAGCATTAAGGATTTGCAGATTTTCCGGTTTCTTAA AAATGGAGGTCTTCTACTGGCAAGAGTAATAGCAGTGACATTTTGTGTGACCTTAGCAGCCTCATTGGCAGCAAGGTTAGGTCCAATTCCTATGGCTGCA TTTCAAACCTGCCTTCAGGTTTGGTTGACATCGTCGCTTCTTGCTGATGGTTTGGCTGTTGCTATTCAGGCAATTCTAGCTGGTTCGTTCGCTGAGAAAG ACTATGATAAGGTAACTGCAGCTGCAACAAGGACACTACAGATGAGTTTTGTTTTAGGAGTCGGGCTGTCTCTTGTTGTTGGAGTTGGATTGTACTTGGG AGCTGGAATATTTTCCAAAAGTGTTCTTGTTGTGCAGTTAATTAGATTAGGCATTCCGTTTGTTGCTGCTACTCAACCGATCAATTCATTAGCCTTCGTC TTCGATGGTGTGAACTATGGAGCATCTGATTTTGCTTATTCTGCATACTCATTGGTCATGGTGTCACTAGCTAGTGTAGCTTCACTATTCCTTCTGTACA AGAGCAAAGGTTTCATCGGAATCTGGATTGCGCTAACCATCTATATGAGTCTTCGCATGTTTGCGGGTGTATGGAGGATGGGAACAGGAACAGGACCATG GCGCTTTCTGAGAGGCCCCTCATTATCTTCATGATAGTGCTAACCTTACCATATTGTACTTTATCACCTTCCCCCCTTCTCTCCCATAGTTCCTATGCAA GTTCTTATTTTGTGCTTATTTACATTATTCTTCTTCCTACTATATCAGTCTCTAAACTCATGAGTGCTTATATATATACATACATATGAAAAATAAATTG CTTTTCAAAACâBLAST |
Tissue | pods |
Gene name | LI_gene_164219; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_285839
Blastp | Protein DETOXIFICATION 43 from Arabidopsis with 59.14% of identity |
---|---|
Blastx | Protein DETOXIFICATION 43 from Arabidopsis with 59.14% of identity |
Eggnog | Mate efflux family protein(COG0534) |
Kegg | Link to kegg annotations (AT3G08040) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019425461.1) |
Pfam | MatE (PF01554.17) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |