Ll_transcript_285896

Id TrinityTRINITY_DN48824_c2_g1_i2
Name TranscriptLl_transcript_285896
SequenceTAAAAAAAAAAGAAGTGCAAGAATTCAAAACGTTGATTCCCTCGCAGTTGTTGCCCAAAATTCATATCCCCCAACCCTATTTATACGCTTCACTTTTCAT TGCTTCTCACAATTCATTCTTTTTCATTTTTCATTTTTCATTTTTCAATTTTCAATCTCTCTCTCTTGTTCCTCCCAACCACTCACATTTCACCAAATGG CCCAATCCAGCGACTCCAACTCAGTCCCGAACCGTCGTCTCCCATGCGACTCTGACGGCGTTTGCATGCTCTGCAAGACCAAGCCAACCGCCGTCGTTGA CACTCTGACCTGCAACACATGTATCACTCCTTGGCACCTTCCCTGTCTCCCTCTCCCCGATCGCCCTCCCACCATGTCCGACGCTCAGAATTGGTGCTGT CCTGACTGCGCTGCTCCCGCCGCCGTCACCCACCCTCTCCCTCACCCTTCCTCCGATGATCCTTCTTCTCAACTCATGGCTTCTATTCGGGCCATCCAGG AGGATGACTCTCTCACTGATCAACAAAAGGCCAAGAAGCGTATGGAAATCATGCTCGCTTCCTCTAACATCGCTGATTCTAGTAACCCCTCTTCTTCTGC GCCTCCTGGCGTCAACGCTGCGCTTGATATCTTTGATGGAAGCTTCAACTGCTCTATTTGTATGCAGCTACCTGAGAGACCTGTCACGACACCCTGTGGT CATAACTTTTGCTTGAAGTGTTTTCAAAAGTGTTTCTCACAAGGCAATCGAACATGTGCTAATTGCCGTGGCGCAATACCGCTCAAGATGGCCACCAATC CTCGCATCAACTCCCAGCTTGCATTTGCCATCAGATTGGCAAAGATGGCCAGATCTGGCTGCGCCGTTCCTGCGGGTGTTCCTAAGGTATACCATTTTAT CCACAACCAAGACCGTCCTGACACCGCTTTCACCACCGAGAGAGCAAAGAAGACTGGATTGGCAAATGCCTGCAGTGGGAAGATCTTTGTGACCGTTCCC CCGGACCACTTTGGTCCCATCCCTGCAGAGAATGACCCAACAAGGAACCGTGGTGTTCTTGTGGGAGATACTTGGATGAACAGGATGGATTGTAGACAGT GGGGTGCTCATCTTCCCCATGTTGCTGGCATTGCTGGCCAGAGTGCTTATGGTGCTCAGTCTGTTGCCCTCTCTGGGGGGTATGTTGATGATGAGGACCA CGGCGAGTGGTTCCTCTACACTGGCAGTGGAGGAAGAGATCTTAGTGGCAACAAACGCACAAACAAGAACCAGTCATTCGATCAACAATTTGAAAATATG AATGAGGCTCTCAGACTAAGTTGTCTAAAGGGCTATCCGGTGCGTGTTGTAAGGTCCTCCAAGGAGAAGCGATCTGCATATGCACCAGATGAAGGTGTAA GATACGATGGTGTCTACAGAATTGAGAAGTGCTGGCGCAAAGTGGGACAACAGGGTTGCAAGGTCTGCCGGTATTTATTTGTGAGATGTGACAATGAGCC TGCACCATGGACAAGTGATGAATGTGGAGACAAACCGCGCCCACTGCCTAAAATTAAGGAGCTGCAGGGTGCAGTTGACTTAACCGAAAGGAAGGCAGCT CCATCATGGGATTTTGATGGGGAAAAGGGCTGTTGGTTGTGGAAGAGGCCTCCACCAGAAAGCAAGAAATCGGCAGGCACTGTAAGCCCTGTGAAAGGAC AAATAAGAGCGGTTAAACGAAAAGTGAAAGTTGCATCTGTAAAAGACAAACTCCTGAAAGAGTTTGCTTGCCAAATCTGTCGCAAGGTGATGTGTAACCC TCTAACAACACCCTGTGCTCATAACTTCTGTAAAGCCTGTTTGGAGGGAGCATTTTCAGGCCAAAGTTTCATCAGAAAAAGGGCTGTCCAAAGTGGACGT TCATTACGTGCACAAAAGAACGTCATGAAATGCCCATCCTGCCAAAACGACATAGCTGAGTATTTGCAGAACCCACAGGTTAGTCAGTACAGATATTCTC AATCAGGTTTTCATATTCAGTCAGTTTACTATGGTTTGATAAAATGGATGGCCTAGTATATGCTAGGCTCCCACCTAGTGAAGTATGGGGAGAATAGTAA TACGTAAATTGTAAAATTTTCCAGGTTTTGTATAAGCACTGGATATTGATTATTACTTAATCTAATCCAGATGTGGTATTTCTTTTAATTGTATTTCCAA TTAAGACAGAATGCTTAATATTATTAATACTGTGATGGTGGAAAATAATTTATACTACAATGGCTTTAGGTAGTAAATGCAATTTACTAAGGCATAACTG GTTAGTTGTAGATTCTTGTTAGATACTGTATAGTCTGTAACCTGAATAGTTTTGGCTATTTGTGGTTTTTGTGGCAGGTTAATAGGCAAATGATGGGTAT CATAGAATCACTCCAGTCTGAGGCTGAACAGTTGGCGGAGAATTCTTCAGAGTCAAGTGACAAAAATGATGAAAATCAGAAGAATGAGAGTGATGTTTCG GAACCTTGTGAGGAGGAGGAGGATGGTGATGATGATGATGATTCAAGTGAGAAGGTCCTGGAGGAAGTTAAGGACAATGATCTGAACTTGCCACCACAGA AGCGGAGGAAAGTGGCTAAAGGTGCAGTTGTGGTGACCGAAGAGGAACACATTGATGAAGTTGAACAAGACAGTGTGAAGGCTTGCGCTTAAAAAGGTTG GTGATGGGTAGCAGTGAAGTTTTTTGGATGTGGTCATGCGGTTGTTGCAGTGAAGTTTTTTGGATGTGGTCATGTGGGTGTTGCATCGCTCATGTGAATT GAATTATTTATAGCCTTATTATCTCTCAGACATGAACTGAAATATGTCTTTTTTATAATTTTTCTTGAATTGGCAGTGCATAGTTTTCTGAACTTTGGAA TGAGTAACTGCTATGTGTAGCAGTAGGTTTTCTTTTTGTCAAACTAAATGAAATGAATGAATGCATTTTGTGATGTTATGCAATTCTTGTTCCTCATATT TAGAATAATAATCAAGGGAATTGAATCACTGCCACCACAAGGAGGATGAACC BLAST
Tissuepods
Gene nameLI_gene_164236; 
Additional informationdetails; 

Expression of Ll_transcript_285896

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_285896
BlastpE3 ubiquitin-protein ligase ORTHRUS 2 from Arabidopsis with 61.45% of identity
BlastxE3 ubiquitin-protein ligase ORTHRUS 2 from Arabidopsis with 61.08% of identity
Eggnogubiquitin-like with PHD and ring finger domains 2, E3 ubiquitin protein ligase(COG3440)
KeggLink to kegg annotations (AT1G57820)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019435773.1)
PfamZinc finger, C3HC4 type (RING finger) (PF13920.5)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;