| Id Trinity | TRINITY_DN48827_c0_g1_i16 |
|---|---|
| Name Transcript | Ll_transcript_284325 |
| Sequence | ATACAAACCATTTCCAATTTCTGATTATAGCTAATGCAATATGAATATGGACTGGTCCACTTGCCCCTTCTGTGATATATCTGTTCCCTCATCCCAACTT CAATGGCACGCCAATGCTCACTTTGATGACCACGAAGATCTGCCCCAACAATTTCATCTTCCTTCAACTCCATCCCCTAAACCTCTTCAGAGTGAACAAG CAGCCAGGGACTCGCAGTTCGGAGAAACATCCGGAGATTGTAATCATTTGTATGTTGGTGAGACCAGCAGAGATAATGGGGAATGCACAATGGATGACAA GGTGTCTTCCTTAATTGGTTTACAGGAAAGGAGTAAATTTTACAAAGTTGAAGTGGGCTTGATGGCCTTGTTGAGAAACTGTTTGGAATCGGAACCTGAA AACTCAAAAGCCATTTTGTCAGGTTATGTTGATCATTTCCAGAGCGTTGAGTTCGAGGATGCGGGATGGGGTTGTGGTTGGCGTAACATTCAAATGCTTT GCTCTCACTTGCTAGTACAAAGACCAGAAGCAAGAGAAGCTTTGTTTGGTGGTTCAGGATTTGTTCCTGATATCCCTTCACTCCAGAGATGGCTTGAGAT TGCTTGGGAAAAGGGTTTTGATACAGCTGGATCTGCTCAATTTGATAATGCTATTTATGGTTCGAAAAAATGGATAGGAACTACTGAGTGTGCTGCTCTT TTGGGTTCCTTTGCTCTTCGGGCTAGAGTCGTGGATTTTGGTCCCAAGGAATCTGAATCATGCATATCTGTCCCAGGTTCAAGTGTTGATGATGCTTTGG ATAAAGCTAGTAGTGATAAGTTGGTCAAGAGTAATGCTAAAAAAAGTAAGGCCTATCAAGTTCTAATGGATTTTGTGTGGAATTACTTCTCTGATAAAAG CTCGATTCAATTTGATCGTCAGCATGTTGTGATCAGTGAGAAAACGCCCTTGTACTTTCAACATGATGGTCATTCAAGAACAATAGTTGGAATACAAGTC GAACATCAACAGAATGGAATTCTGCAATATCATCTCCTAATTTTGGATCCTGCTCATAGTACGGTTGCTATTGAAAGATCACTTACGGAGAAAGTTGGAT GGCAGAAACTCATGAAAAGAGGAATGCATACTCTAGAGGAGCCACAATATCAGTTGTGTTATGTTGATCCTGGAATTGCCGGTGGGGAGGAGTTGGAAAA ACTCAAGACAATCGATAGTGCCTTCCTTGAATTTTAGACAAACATATAAAGAACTTTGCTACATCCAGGTACTATCTAGTATCTTCTATTTCATGCCATC GAAGTAATTTTCTTGGCACTTATATTCTGACTGTAATTGTATTACATCAGAGAAGAAATAGAATAAAATTATAGTTCTATGAATGTATACATGTACTTTT TCTAGTTACACATACAATATCTGTATAAAACTGTAAACCCTGTGAGTTTTCTTGAAATCTCTGTAACTTGCATAACCTCAAAAAAGTGCTTCTTCACAAC TTTTCAGACTCAGTATCAGGGTACTATTGTCCTCATCAGGCAGAAGGATGGAAGGACTTTTCAGAATGGCTTTTGCTATTGCAATTCTCTGTTTTTGGCC TCTTGATAATGAACAAGGATCGTCTGGACCTGGTTTTTCATGTCCCGGTATCCCACACCAATCTGTGTTGGCCAACAAATGAAAAGTAATGCTTAAATTT AATTTAATTTAAAAAAATAATTCATTAAATCCTCATGTTTAGATATAAGTGGATGAGGCAGAATTGAGGACACCAACTTGGGACAGTTGATCCCATCTGT TGATAATTGAACGCCACTTTGTCCTACCTAGGTACAGACATAATGGCTCATAAATGTTGATAAGTGAAGAAATATGTGTTGCTGGGAGACATGTTTCTTG ACATGGCAAAACAACTCAAATTGTCCCAGCCCGGATCCACCACAGGCAAGTCCAAAACGAGGTGGGATTAGTAACTCCTTTTGTTTGGTGGGTTGGTACA CATATTTGTGTGCAAAAAATGAGGTTAAAAATAGTGAAATTTGTATAGATGCAAGTGTGTATAAGTAGGGAGCATTTTGTGTGTCACTTTGTGTTCCAGT ACTTGTAATTGGTTGAAAATATATATTTAAAATAAAAATTTAATTATGAAATAAATTTTTGACCAATGAGAACTAATGGCGCATAAAATGATACGTACTC TTGGGACAAAAGATGTTGACCCCTCACGCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_164269; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_284325
| Blastp | Zinc finger with UFM1-specific peptidase domain protein from Rattus with 34.19% of identity |
|---|---|
| Blastx | Zinc finger with UFM1-specific peptidase domain protein from Rattus with 34.19% of identity |
| Eggnog | Zinc finger with UFM1-specific peptidase domain(ENOG410XRQT) |
| Kegg | Link to kegg annotations (294390) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019415985.1) |
| Pfam | Peptidase family C78 (PF07910.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |