| Id Trinity | TRINITY_DN48832_c5_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_286352 |
| Sequence | AGAAGAAGAAAGCAAGAACCTAAAAGAAGCAAAGGGAAGGAGAAGGAGGAAGGAGTGTAGTAGTTTCTGTTTGTGTTAATATCGTGTTGATTGATCTGAT TGAAAATGTCACATGGCGATACAATTCCCCTTCACCCTCACCTTTCTTCCCAATCTGATATCGATGAGATCGAAATTCTCATGAATTCTTCTCCCGCCAC CGTTCTCCCCGCCAATCCCCCACGCGCCACCATCCCTATCTCTTCTTCTCCGCCTCCCAATCTCCCACCTCCTCCTCCTCCCAAACCATCTCCACCCTCC ATTCCAATTCACAAACCCGCATCTCAACCGTTCCCCTCCCGACCCGAATTACCTCCTTCCGGGTTCGGATCCGCTCCTAATACCCTCACCGAACCCGTTT GGGACACCGTCAAGAGAGATCTCTCGAGGATCGTTAGTAATCTGAAGCTGGTGGTGTTCCCCAACCCTTTTCGTGAAGATCCTGGTAAGGCTTTGAGGGA TTGGGATCTGTGGGGTCCATTTTTCTTCATCGTCTTTCTCGGTCTTGTTCTCTCTTGGTCTGCTTCTGTTAAGAAGGTAACTCTAACTTCCTGCTTTTTT ATCTTGCATTTTTCATTGGATTTTATTCTATGTATGTTGTAAACGCAAAATCAGGATTGAGATTGGGACTCATACTTATATTGTTGGAATTGGTTTCTTA TTGCATTGTATAATTAGGTTATTGAGGCCAATGTAAGAGAGTTAGTGAATCATTTTGGTAAAAGTGATATCGCTTCGAGTCTCATAAGGGAGGCTCTATC GTAGATACAATTGCTTTCATGTTTGTCTTACATATATGAATATAAATCTGGATAGGTTCTTGTATTGACATGCTGCACTGCTTCAGTGTTGCATTGAACC AACAGCCACAGTCTGTTGTTTTCTCACTTCTCAGAGCCCGGAACTACCATTTTGTGGTGTCATAGGTTTGGCGCAAAGATTCTGTGGTTGTGCGCAATAG TTTTTAAGGTTGAGAAAGGAAATTATTAGCCTTATTTTAGCTTTTTATCGACCGCATATTTGGTTTTTGTTTAGATTGCATTTGTTTGACAGAAATGTAA TATTGGCTGTAGTTTTTTTTTTTTTTAATAGCCATATTCCTCTGCATATCTAGCAAAGAAACACTGCTAAAAAGCTCATGTGAGAGCACCAAAAATATGG CAAAAAAGTCACCCTACCCCAAAAGAAATCAAGAGGAAAAAATAAGTCATAAAAATTCTCCTATTCCTTCCCCTTCAGTTCTTTAATCGTTATAAAACAG TGTTATGACTGATGAAATTACAGATTGGTGTTGGCTATGAGATTCCTAATTATCAATAGACTTGCCACTACCAAAGGGCATACAATTCTTAGGGTAGTGA CTAGCGTGAGCTCGGTATGATAGAGCAGTGCACATTGTTGTTTGTATGAATTGTGCAGTTGTTATGTATAGATTTTCCTTCCATTTATCCCCTTTGGGGC TTCGTCAAGTTAAATTTCAGTTGGGTGTGTATATAGTGATCAGTCCGTGGAGCCGATAGTTGTAATTAATTTTAACAAATTTTTCTCATGTAAGTTGTAT GCCGTTGTAATAATCATTTTGAAACTTCAGTTTGATTGGAGTTCAGTTAAGTTTGTATCTGGGGTTTGATTTTTTAGTTCACTCCTTCTCCTTTGTACTA TGTTTATGTTATAATCATTTTGGTAACTCCCCTCTATTTTATTTGTCTTCGTTGTAATTTGCATGGTGTATTGTATAATTACAAAATGATTATTGGTAGG TAGTTATGTGAGTTATGCCCTTCCTCACATTTCTTTCCCTGATTGTTCTCAGTCTGAGGTTTTTGCTGTTGCGTTTGCTTTACTTGCTGCTGGTGCTGTA ATTTTGACACTGAATGTACTGCTTCTGGTAATATCTTCTTCCTCTCTTCCATCTAGTCATATTTTGAGTGTCAACTTCAATTTCTCAATAGCATATTTCT ATGTAGTGTTGAAGTTCGGTAATGTATAAAAAGGAAGATTTAGTTGTACACAGGTTGCATAATTGAGAAAGAAAAAGGGTGGGGGAATTTAACCATTCTT GAATGTATACCCTGATGAGTGATGGCTACCAAATATTTGACTTTGTCTTCATCTGTTCACATTTTCAGGGTGGACACATTATTTTCTTCCAGAGTCTGAG TCTGCTGGGTTATTGCTTGTTCCCTCTTGACGTTGGTGCATTAATTTGTATGTTAAAGAACAATGTCATACTGAAAATTGTTGTGGTGTGTGTGACATTG GCGTGGAGTTCTTGGGCTGCATATCCGTTCATGAGTTCTGCTGTCAACCCTAGGAGAAAAGCTCTTGCACTCTACCCAGTTTTTCTCATGTATGTATCTG TTGGTTTTCTCATCATTGCCATTGACTAAATTCATCAATGCTTCTAATTACTATATTCCCATAACTGCTTGGAATATGATTCTAATAGAATTTTTGTTTA TTGATCAACCTTTTTAAATTCTTTTCGCCCTTATTTTGTTTCCCTGCCCCGTCTTTTGTATGTTTAATATTTTGGTTAGGTATATTTGAACACAGACAGT TGTATAATACTACGTGGAAGTTATATGATGGGATCAAACCTACAATAGCAATCTCGATAAAGTTATGTTTACCCATTCTATTATTTAATATGTGAATGTG AAAACGGATGAATTTGATGGACCCAGAGAAAGAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_164308; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_286352
| Blastp | Protein YIPF6 homolog from Dictyostelium with 38.82% of identity |
|---|---|
| Blastx | Protein YIPF6 from Silurana with 40.21% of identity |
| Eggnog | yip1 domain family member(COG5080) |
| Kegg | Link to kegg annotations (DDB_G0282825) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019454209.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |