| Id Trinity | TRINITY_DN48833_c2_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_285281 |
| Sequence | TAAAACCTCAAACCCAGTCCCAAAAAAAAAACAAGAGAGAAAATTGAAAGCATGAAGTTCCGTTACGCCATGGTGTGTTCATCGAACCAGAACAGAAGCA TGGAAGCTCATTTCCTTCTCAAAAAGCAAGGCTTCGATGTCTCTTCTTACGGCACAGGTGCACACGTTAAGCTCCCTGGTCCCTCCCTCAGAGAACCCAA TGTCTACGATTTTGGTACTCCCTATAAGCACATGCTCGATGATCTTCGCAGAAAAGACCCTGAACTCTACAAGCGGAATGGAATTTTGCCAATGCTTAAA AGAAACTCAATGGTCAAATTGGCACCTCAACGTTGGCAAGAAAATGCAGCTGATGGTTCCTTTGATGTGGTATTTACGTTCGAAGAAAAAGTATTTGATA TGGTTGTTGAAGGTTGGTACTCTTGATGTTTTGTTTCATTCTTTTGTGCTCTCTCTGATTGTTATGATGTAACGAAACGTAAAATTGGATTGTAGGATAT TCAAATTTTACTAAATAGTTTTTAAGTTTGCTGGCAATATCAAACTTCCTTCTCCGGCTTCTTATTGAATTGGAGACAGACTCAGTAAGGGTGCAAATAT CATTTATCTTTCCAGTCATTGTTATTAACAGCACTAATTTTTGTGTTATCACGTAACCATGTCCTTCTGCATTTTTTCCTTCTAATAATAAGTTGTCAAT TATTAAATAAAAGTTGGTTTTGCCTGACTTAAACTTAGTGGCAAGATTATATAAGTTTTCCAGGAAGGAGAGTTGTTCCCGGCGCACACATGAGTACTTA ATATTTCCTTACTTTAGCTCTTAATTTTATTTTCTATCTTTGGCTTAATTGATGGTTTAATTGAACATCATTGAAGCTGTTAAGTTATTTTCATAGTCCT TCTATGGCTGTTGTTGTGGAAATCTATCTAGTCATCTACCCATTAGAAACTTTAGTATAGACATATGTGGAATAAAGACCATGCCAAGTCCAATGCCTCT TTATTTGAATCCATGTTCGACATCTATCTAATAACATCGACAAATTGTAGATCTGCACAACAGAAATCACGTCTTAATGAAAACTGTGCTGATAATCAAC TTGGAGGTGAAAGATAACCACGAGGAAGCAGCCGTAGGAGCAAGGCATACTGCAGATCTATGTCAGGAGATTGAAGCTGCTGAATCATGGGAGGAGTCAA TTGATGACATTGTCACTGGTTATGAGAAACAGCACCGGCGGAAGCTTTTATATACCATCTCCTTCTACTAAAGATACCTCAAATCAGTTTCTGTATATTT GACATGTAGATTTCATTTTAAATGAAAACTAATGAATTGGCTTGTTGTGCATTATGACTTGAAAGAATTAAAATACCATGAAAAGGAAGAAAAATGGTGC ACTTGTTTGGCCTTTTCATTAGTCTTTTGGCAAGGAGTGGAATTTTGTAGTTTTGTAGTATGAGATTAAGTAAGTTGTTGTGACTTCACTGATATGAGTT GTGTTTTAAGGAGTAAGGGGTTGCTACTGTTTGAACTTTGAGACAATGAGATAACTTGAATGTGGGTGAGTTGTTTACTGCATTGATGATTCCTGCATTT TGACCATGCAGGTAGCATTTTTAATGTGCCAATCTTTCATATCTAACATTTTGCACCACTGTTGTAAAAACCGGTCCGTGCCGTCCGGTTCAACCAGTAA ACTGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_164321; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_285281
| Blastp | RNA polymerase II subunit A C-terminal domain phosphatase SSU72 from Dictyostelium with 55.08% of identity |
|---|---|
| Blastx | RNA polymerase II subunit A C-terminal domain phosphatase SSU72 from Dictyostelium with 55.08% of identity |
| Eggnog | RNA polymerase II subunit A C-terminal domain phosphatase(COG5211) |
| Kegg | Link to kegg annotations (DDB_G0272871) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019436756.1) |
| Pfam | Ssu72-like protein (PF04722.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |