Ll_transcript_285344

• Id Trinity: TRINITY_DN48835_c0_g3_i5
• Name Transcript: Ll_transcript_285344
• Sequence: ATTACTGGAGCTGCAAGGATTGGAGTAGGGGAGCATCCGGAACGAGTAGGTCAGCCTGTGTGCCAGGTGTTTAATCCGCTCCTCTTATCGTCTATGTTGT GATACATTGGATGTTTGTCTTTGAGAATTGACATTGTAATTTGTTTCTGTTATACAAGATAATGTGTTCAATATTTGTTTATATATGCCAAATTGTGAAG CCAAGGCTGGACTCAAGTTGACTTCTATTTTGTTTTCTCGTGTCCTTAAAGTTTGGTACATTCCCTTTGTCTTGGTTAAATCTGATTTTACTTAAACTGC AGTATTATATGAGGACGGGATCATGCAAATTTGGCCCTTCCTGCAAATACCACCATCCCAGGCAGGGAGCAGGCATTGCTGCCCATGTCTCACTAAATTA TTATGGATATCCATTGCGACCGGGTGAGAAAGAGTGTTCCTATTATGTGAAAACGGGACAATGTAAGTTCGGTTCAACTTGCAAGTTCCATCATCCACAG CCTGCTGTCGTCCAAATTCCACCACTGCCACCACGGGTCCCCCAAGTTCCACACTTATCTGTGCCGATGCCTTCACCGCTATATCCAACTGTACAGCTTC CGTCTGGCCCATCACAACAATTTGGTGTACTGGTTGCAAGGCCACCTCTTCTATCCGGCTCATATGTCCAGAGCCCCTATGGACCTGTGGTGCTGTCACC TGCCATGGTCCCTTATTCAGGCTGGGATCCTTATCAGGCTACTGCAACAAGCCCCGTACTTCCCTCAAGTACTCCATCTAATGTTGGTCCGGCACAGCTG TATGGGATAACCCAGATAGGTCTATCAGCAGCTGCCTATACTGGACCTTATCAACCTTCTGTTTCCTCGGTTGGACCTTTAAGCAGTAATCAGAAGGAGC ACTCACTTCCAGAAAGGCCCGACCAACCAGAATGTCAGTATTTCTTGAAAACAGGGGAGTGTAAATTTGGTCCGTCTTGTAGGTACCACCATCCACCAGC CATGAATGCACTAAAAGCGACTGTGACTCTTAGTCCTGCGGGACTTCCTTTGCGACCGGGCGCAGCACCTTGCACTCATTATGCACAAAGGGGAGTTTGT AAGTTCGGTCCTGATTGCAAATTTGATCATCCTGTAGCATCACTGAGTTATAGTCCATCTGCTTCTTCTCTGGCTGACATGCCGGTTGCACCATATCCTG TGGGTTCATCAATAGGTACACTTGCCCCATCATCTTCATCATCAGAGTTGCAGCCTGAACTTGTCTCAGGATCCAGCAAGGAGCCCGGTTCATCCAGAAT GTCTTCATCAA
• Tissue: pods
• Gene name: LI_gene_164347;
• Additional information: details;

Expression of Ll_transcript_285344

FPKM

• PAB: 0
• PNAB: 0.2
• PS1: 0.7
• PS2: 0.5
• PS3: 0.3
• PW1: 0
• PW2: 0.2
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_285344

• Blastp: Zinc finger CCCH domain-containing protein 58 from Arabidopsis with 58.68% of identity
• Blastx: Zinc finger CCCH domain-containing protein 58 from Arabidopsis with 58.16% of identity
• Eggnog: zinc finger(COG5063)
• Kegg: Link to kegg annotations (AT5G18550)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019431775.1)
• Pfam: Zinc finger C-x8-C-x5-C-x3-H type (and similar) (PF00642.23)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;