Id Trinity | TRINITY_DN48837_c7_g4_i3 |
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Name Transcript | Ll_transcript_286028 |
Sequence | GGCCAAATTCCCCAATGCCAAACGTGGACAGGGATATGGGATGACAGAGGCTGGACCACTTTGTATAAGCTTAGCATTTGCGAAAGAGCCATTCAACATA AAGATAGGTGCATGTGGGAGCGTTGTTAGAAATGCTGAGATAAAAATCGTGGACACAGAGATGGGTGCTTCGCTGTCCACAAACAAAATTGGTGAAATTT GCGTTAGAGGCACGAAAGTTATGAAAGGATACCTGAATGACGCAGAGGCGACAGAGAGAACTATAGACAAAGAAGGATGGTTACACACTGGTGATATTGG TTATTTTGACGATGATGAAGAGCTCTTCATCGTTGATCGGTTAAAGGAACTGATCAAATACAATGGATTCCAAGTAGCTCCTGCTGAACTAGAAGCAATG TTGATTGCTCACCCAAATATTTTTGATGCTGCTGTTGTTCCGTTAAAACATGAAGTTGCCGGAGAAGTTCCAGTTGCATTTGTCGTGAGATCAAATAATG GTTCTAAGATCACGGAAGATGAAATCAAACAATATATTTCACAACAGGTGGTATCTTACAAGAGAATCAATAGAGTTTTCTTCACAGACACTATTCCTAA AGCAGCCTCAGGCAAAATTCTACGAAAGGAATTAAGTGCAAGGCTTAACGAAGGTTTAGTACAAGCCAATTAGGTTCGTGTGACACAAGAAAGTCATCAA GCCTTTGTGTTTTGGTTTTCTTCCTATTTTTGTATGTTATTATATTATAAATACAATTGAACGACTTTTCTATTTCCATAAATAATTCAATAATTTAAGA ATCAACAATAAAGAATCTACTCCTGGTTTGGCATATTCTCGGTTATGCCTTATGATATTAAAGATAATTTTTTCTGTCACGAATCTCTCTTGAGGATGGG GAAGAAGAGTCATAGTCTATGGATGTGTAGCTAGTTTATTGTTGTTTGGTCTATTTGGTTAACAAGAAATAAAACTATCTTTGAGTTGACGCCTTTTAAT TTGGAGGTGGTATTGTTTTCTATCCAACTTCACTCTTGGAATCTTATAATTGC BLAST |
Tissue | pods |
Gene name | LI_gene_164374; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_286028
Blastp | 4-coumarate--CoA ligase 1 from Nicotiana with 74.43% of identity |
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Blastx | 4-coumarate--CoA ligase 1 from Nicotiana with 74.43% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (107803673) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019464236.1) |
Pfam | AMP-binding enzyme (PF00501.27) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |