| Id Trinity | TRINITY_DN48848_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_284480 |
| Sequence | CAACAACATGTAAGTATGTAACTCTCTCTCTTATAAAAACAATCTCATCTAATATAATATTATGTCTGCATATTTAGAACCGCCTCTTGTTTTTTCAGAA AAAAATACACTATAAGTTTTCAACTTGAGGGCTCATTACTCATTTATTGTATTCTACAAGTGCTTCATTTCAGTTCTGCCTCTCTTTTTTCTTCAGACTA CTTGTCATGGATTGCTACTATGGTTGTGATGTCAATGATTTTAGGGTTCCTAAAGATCAAGATTTATTGGATTGGCATCCTTTACCAGAAAGTTGGTCAA ACTGGGGAATAAGTGCTCCTGAAGGTTTTGATTCACCTAAGCAGTATTTCACCAGCGATAGAAATGCGTCCGACTTAGAATTCGATTTCATGGAAGAAAG TTTTGGTAATGAAGTTGAGCTTGAACATTCTCTAAATGATAAAGATCAGTCTACCAGTTCAAGTTTTCAACAAACACTTTCTTCGGATCAGCGTAATTAC GAGCTTCAAGGCCTATCATGTTTAGAACAGACGGGTGACATTTTCTTGTATAGCTTCTGAAATTCTTTTACTTGGCATATGTATGCTATACATTGTAGGA AACCCGGTGCAAATTGAATTGCTCTGTGATGTTTTTGCATTCCAAATTCGTCATATTTATCTTTATGATTGGAGCCAAAACTGACACTAGCACAAACATA CTACTTATGGTTATGGTTCATAGAACTCTATAGCATGAACCTGTTATAGAATGGTAAGGGCTCCTCCCCCTTTCTCGAATAATTCTAGCCATAATTCTAT TACAAAAAGTCTTATTTTCCATCTTGCATTACTCGTGTATCATAACCAACAGAGACATTCAAGTTCACTGGCTTAACAGTTCAATGACTATTATTGTGTT ACAACCCTGACATGTTTCACATAATGCAGGGATTCTGTGATTGACGATCTGTCCTGTGTTGAAGAACAACACAATTCCTTTTACTTTTGTCCTGAAAACC CATGCAGTAGTACACCTCGTGGATTGCAGAAAGATATCGAAGCTTCAAAGTTTGTTCCAAACAACTTAAACTCTAAGGATTGCCTAGATATAGAGGTGAA ATTTGACTTTTGTCTAGTACTTGAAGGGTGTTTGTCTATCATTTGTCTCGGAGATGCTATGAGCCTATGACCTTGGTTTTCTAGAAATAATCTGTTGAAA CTCTCTCGCATATACCATGATGATATGGATAAACGCCGTCTCCCCCCACCTTTTGTTTTGTTTAGAGTGTTACATAGCTCAAATGAACAATTCACTTAGT GTTGGTATAGACGGAAAAGTAACATCTGTAGTTTTTTTAAAACATGTTGATATTTTGTGGGAAAATAGATTGAATCATGACTGTATATGATTGTTGAAAC CAATGGAACTAGCTTTTATCAGTTTTGGGGCTTACGGTATTATCGTAATCTATATAATTTCTCTTTAAGGTTCTGACAGTCAAATACTTGTACCCCTTTA AGCAGTGCGATAGATATGAAGCCATGCATGAGCAGTATTCTAATGAAGAATCGATACTGCAGAATCTTGAGATGGCAATTGCACAGGTGATGTGACTGAG AATTGTGTTGTTTGCCATTTAATTATAAGCTATCATACTTGTTGCTAATTTTCTTTTTCCTGTTTCACGACCAGTTCACTGGGAAAACCCGTATTTGTTT CCGAGATGCCTTATACCGCCTTGCCAGAGATACAAAACATGTAGTAGAGAACCTGGATGGTGGCCTTAACATGCAAACGACAGTGCTAGGGGAAGTTACC AATGAAACCATGAGGTCTGAAGACAATGAAACAATGGAATCTGATACCAACAGTGTTGACAGAGCAGTTGCAAATCTTGTGTTCAACAAGATGGAAACTA ACATTCAAGATCTTCCTCTTACAACATCAATCAAATCCAACCAAGAAATAAATGTAACATAAGGTTTTCTGGTAAATGGCTCATCAAAAGCCTCGAATCC GGTACGAAAATTTCATAATCCCATCCACCAAATATTGCAAGGAGGTGCTGAGGTTCATAAATTCCATATGGTGATCCTACATACAAGTCTTTCATGCTAG AGTTTTTGTTAGGTATTATGATAGTGAGCTTAGTAGTAGCTAAACCAGAAATGAGAAAAACCATTTTCCTGTGTAATTATTTAGCACTTTATGCTGCAAA GAGGCCTGTTATTTTTTACTATATTGGTTTCTTTGATCTGTATGTATGTATATATTTGCACCTTAATTTCATGATGTTTTGAAAAAACTCGTGCATTGCA TACTAGTTCTTATCATGGGCATGCAGCATTGCCTTCGGGAATGCGGACAGAGGTCGTGACTGTCATTAGCTCGCCTTGTAATGTAAGGTGTTGGGTTAAG TCCCGCAACGAACACAACCTTCTTACTTATCGACTATTTTTTAGTTTATTTTTTGGATTAAGTGTGGAGATAATCTCTTGAACTAATACACATCTTATCC TTTTATATTGTTGGACTAGATAAGTTCCCATGCCTTTAATTTTTGGTTTATTATTAAGTTTGATATGTTTTTTATTGAGTTTCTTATGCCTAATAGACTC TTACCGTTGTCAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_164473; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_284480
| Blastp | - |
|---|---|
| Blastx | Protein LNK3 from Arabidopsis with 42.86% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | Link to cantataDB annotations (CNT0002100) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019434721.1) |
| Pfam | - |
| Rfam | SSU_rRNA_archaea (RF01959) |
| GO | - |