Id Trinity | TRINITY_DN48848_c0_g3_i8 |
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Name Transcript | Ll_transcript_284492 |
Sequence | ATATATTTTTTAATACATGCAATAACATATGATAAAATGATACGAAAAAATGGGATAGAAGATGTGGTCCCTATCTCTATATATCTTATAGAAACACTCT TTATCTCATTAATATAAATATTATATATGCATTTCTACAACCGACCTTAGTTTTGATACAGCTACCACAATTCTAAGAAGAAGAAAATACTAAGAACTCA ATAAGTTTTCAACTGCATTCTCCAAGTGGTTGATTTATTTTCACCAATAAGAATCTGAGTTCTGCTTCTCTTTTCTCTTCGGATTATTTGTCATGGATTC CTACTATGGATGTGGCATCGATGATTTTCGTGTTCCCGAAGATCAAGATTTATTGGATAGGCATCCTTCACCAGAAAATTGGTCAGAATGGGGAGGAAAT GCGTCCGAAGGTTTTGATTCACCTAAAAAGTATTTCACCATCAATACAAATTCAACTTTGTTAGAATTCGATTTCATGAATGAAAGTTTCGATCATGAAA GTAAGCTCGAATATTCTCTACATGATAAAGATCAGTCTACCAGTTCAAGTGCTTTTGGGGGATTTTTTGAGCAATCTTCTCAACAACCAACAATTTCATC GGATCAGCCTAATTACGAGCTTCAAGACATATCATGTTTTGAACAGACAGACGACATTTTCTTGTATAGCTTCTGAAATTATTTAACCTGGCATAAGTAT GCTATAAATTGTAGAAAGTCCAGTGAAAATTGAATTGCTATACGGTGTTTTTGCATTCCGAATTTCGTCATATTTATCTTTATGATTGGAGAGTAGACAG ACACAAACATACTACCATGGTTCACAGAACTCTATAAGAATGAAACTGTTATAAAATGGGATTCTATGATTGATGATCTGTCCTGTATTGAAAACCAACA CAAAGCCTTTTACTTTTATTCTGAAAACCCATGCAGCAACACTCATCGTGGATCGCAGGAAGATTTGGAAGCTTCAAAATCTGTTCCATACAACTCAAAC TCTAGTGATCTGGATATAGAGGTGATAATTGTCTTCTGTCTAGTATTTAAAATGTGTTTCATCTATCATTTGAAAGGTGGTTCAGTGTGTGGTGACATAT CTGCAACGAGCATTTCGCTCATCTTGGTATTGATAATTTAAAAATTGACTCGGTAAAAAAAACAATTGAACATTTAGCACTAAAAAAAATCGATATTTTG GGGAGAGATAGAGTAAATCATGACTTCATATGATTTATTAAAACTGATGGAACTAGCTTAAATTGCAAATCATGTTGGTTATTGTGTTTCAGGGCTTACA GTGTATCATAATCTATTTAGTTTCTCTTTAAATAACTTGACAATCCAATACTTGTACCCTTTTATGCAGAGCAATAGAGATGAAACCATGCATGAGCAAT CTTCTCTTGAGGAATCTATACTGCAAAACCTTGAGATGGCAATTGCACAGTTCAATGGGAAGACCCGTATTTGTTTCCGAGATGCCTTGTACCGCCTTGC CAAAGATACAAAACAACAACATCTAGTAGAGAACCTGGATGGAGGTCTTAACATGCAAGAGTCAATGCCACATGAAGTTCTCAATGAAACCATGAGGCCT GAGGATAAGGAACCAATGAAATCAGATACTAACAATGTTGACAGAGCAGTTGCAAATCTCATGTTCCACAAGATGGAAATTAACATGCAAGATCTTTCTC TTACAATATCAGTCAACTCCAACCAAGAAGTGAATGGAACTTAAGTGGCTCATCAAATGCTTTGAATCCGGCACGAAAATTTCGAAATCTCCCTCCACCA AATATTACACGGAGATGCCGAAGTTCCGATATTTGGACAAAGGGACCAGCAAAGAGCTGACAAATCACACATTGCAATATGATGATTCTATACAAAAGTC ATTTTCATGCTAGAGTTTTGTTAGGTATTGTGATAGTAAACTTAGTAGTATAGCTAAATTAGAAATAAGAAAAACCATTTTGCTATGTAATGATTCAGCC CTTTATGATACAAAGAGGCCTGTGATTTTTACTATATTGGTTTCTTTGATCTGAATGTATATATATGCTTTTGCACCTGAATTATTTTTATTCGGTAGTT TATTACCAACGGCTACCTATATCCATTTTAGCTCATTATTGTTTGGTGAGTAAATGGCTGTGTACTGATCAAACAAGGTATTAGCAAACCTTGATATTCT TCATGTTAAGAAAAATGCTAGAGGAC BLAST |
Tissue | pods |
Gene name | LI_gene_164475; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_284492
Blastp | Protein LNK3 from Arabidopsis with 37.72% of identity |
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Blastx | Protein LNK3 from Arabidopsis with 37.72% of identity |
Eggnog | NA(ENOG410Z9PA) |
Kegg | Link to kegg annotations (AT3G12320) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019413137.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |