| Id Trinity | TRINITY_DN48860_c1_g1_i10 |
|---|---|
| Name Transcript | Ll_transcript_285022 |
| Sequence | CTAATGTTTGATCTAGGTGTTTGGAAAGTCCTCTGAGCTAAATATTTTGCTGGCTAATAAATACTGAAGTTGGTCTCTTATTTGAAATGCGGTTTTGATA AATTTTTGGGTTATATCTTACGTAGTATGAATGAGTTTGAAGCATCTCCCCCTTAATTATACTTACAAAATTATCTTCCTGAGATCCAAGGATATAAATA CATTTTTAGGTTTTTGTTATTATGTATGTTATGTTACCTTTTCTTTGTACCATTTTTGTATTTCAACAACTTGATATTACCTATAACATGTTTAATTTTC CATTGTTTTGTCTAGGTACAAGATAGGCCTTAGGTATACTGGTGGTGCTCGCATGCTATTAATGGTTTCTCTAAAGTTTGGCACTATGCCAATTGAGGTG CCTGTTGTTGTTCATGATTTTGACATTGATTGTGAACTTTGGGTAAAAATGAGATTAATACCAACAGAACCTTGGGTGGGATCTGCTTCATGGGCTTTTG TTTCTCTTCCAAACATCAAGTTTGAATTGTCTCCTTTTCGCCGGTTCAATTTAATGACAATTCCAGTGCTCTCAATGTTTTTGATTAAACTTCTTACTGA AGATTTACCCAGACAATTTGTATACCCTGAGAAAATTGATTTGGATTTCCAAATGGGAAAGACAGTTGGTCCTGTTGCTAACGATGTTAAATCTGGAGAG ATGCAAGATGGGAAAAAAAAATATGTTGGCGAACTATCTGTTACCCTTATGAATGCTCGAAAGCTTCCTTATCTCTTCCATGGCAAGACAGATCCTTATG TTATTCTTAGTCTTGGAGATCAAATTATAAGCAGCAAAAAGAACAGCCAGACTACTGTCATTGGGCCTCCTGGAATGCCGATTTGGAATCAAGATTTTCA TATGCTTGTTGCAAACCCGGAAAAGGAGAAGTTACTTGTCCAGGTTAAGGACTCACTTGGGTTTGCAGATTTTACTATAGGTACAGGAGAGGTTGATTTG GGATCTCTTGAAGACACTATAGCGGCAGACAGGATTGTGGTTCTGGAAGGAAGTTGGAGAATTTTAAGAAAGGATTGTTACGGGGTGGTATTACTACGGC TAACATATAAAGCATACGTGGAGGATGACGAGGATGACGAAGTGGATGAAGATGCCATCAATATAGATTCTTCAGATGATAAGTTGTCTGATTCAGAAGA AGCACATGTCACTGATAAGAAGAATGAAGGAGATCCTATGCACCGAACTGATAATAAGTCACTTATGGATGTATTGGCAGCATTGGTTGTTAGTGAAGAA TTCCAAGGAATAGTAGAATCTGAAACTAAGTCTACCAAGAATTTGGATAATAGTTCAAACACAGGCTCTAAAGTATCAAAATCTCCTGTTTCCAATGCTG AGTCAACTCCTTCTTCTACTATTGATAACTCTGAAGGTTTTGTGGGTACATTGTTTTCTTTTATAATGGCTCCTTTTTCATTCCCTTTCCCTTTTCTTAC TGTTACATTCTCTTATTTCGAAGATGAGCCTCAGCGCAATGGTAAGGTTGTTTGTCTTGTGACCTGTAAGTCATAAGTTCAAATCCTGAAAACAATCTAT TCGTATATGAGATAAGGTCATATACATCCACCATCTCGAGCCCCGCTAGGTGGGAGGCTTGTGTAGCCGACAACCATTTATTTATTTTTATAATATCTTA CTTTTCCTCATATAATATGATGTATTATGTCAAGGTTTATAGTCATTAAAGATTGTGTTGTGTTCATTTAAAAAAAAAAAGTTGTAACCGCAGGGTCTGC ATTGTTTTGGTTTGCTGTGGTTACTGGCATATCACTACTAACTGCATTCAACATTGGTGGTTCAAGTTACTTCAATCCTTGAGATGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_164596; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_285022
| Blastp | Synaptotagmin-2 from Arabidopsis with 24.22% of identity |
|---|---|
| Blastx | Synaptotagmin-3 from Arabidopsis with 25.35% of identity |
| Eggnog | Domain-Containing protein(COG5038) |
| Kegg | Link to kegg annotations (AT1G20080) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019413265.1) |
| Pfam | C2 domain (PF00168.29) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |