Ll_transcript_285024

• Id Trinity: TRINITY_DN48860_c1_g1_i12
• Name Transcript: Ll_transcript_285024
• Sequence: CTCTTTTCATTTTTCTCCAACACTTTTCTTCTTCTTCATTTCAACCTTCAACGTTTCATTTATATGCTAATACTTTCAGATTTCAATTCAATTCATGTTT TATACTAAACATGCTATTGCTATTCAATTTCAGCATTTCAATCTTCCTCTGCTAGTTCCACATGATTCTTCAACCACCTTCTGCGAGTTTCCTATTCTCG CACATTTTCTCTTCTACCCTCTGTCCTTGCACCAATCAAGTTAATCACTTTGTTTCTTTCCCTTTGTCCCGAAGAAGAAGACGAAAACGCTTCATTGCGC ATTCTGGGTGTAGGAATTCCCGAAGAAAATTGACCCTTCGTTTCTGTGCTATTCCACCAGATAGTAGTTCCAACCGAAATTGGAACACGGAATTCGCAAA TTCAGCTAGAAGGGGTGCCAAAAGTATCGTTTTTAATCAGATTAGTAATGAAATTGACGAGGATAATGATAGTGGTGCGTCTCGTTCTCAAGAGTCACAA CAGATTCAGTTAGGTTCGAATTTTACCAATTTTCAAGAAGACCCTATTGTAGATAAGTTAAGAACACAATTAGGGGTGATTCACCCAATTCCATCGCCTC CTATTAACCGAGATGTGATTGGTTTGTTTGTGTTCTTTTTCTTTGTCGGCGTTGTGTTTGATAAATTGTGGACTTCAAGGAAAAGGAACAAAGTTAGGAG TGAAGATAGCTTGCGCAGCGTGTTGACGCAGGTACCAACAAGCTCCTCTTGGGTTTTGGAAAAGGATTTGCAGAGAAAAGAATCAGTTGAATGGGTGAAC ATGGTGCTTGGGAAGTTATGGAAGGTTTATAGAGGTGGAATCGAGAACTGGATTATTGGGCTGCTTCAGCCTACTATTGATGACTTGCAGAAACCTGATT ATGTGCAGAGGGTCGAGGTTAAGCAATACTCATTAGGGGATGAACCATTGTCTGTTAGGAATGTAGAACGCAAGACTTCTCGCAGTGTGAACGATTTGCA GTACAAGATAGGCCTTAGGTATACTGGTGGTGCTCGCATGCTATTAATGGTTTCTCTAAAGTTTGGCACTATGCCAATTGAGGTGCCTGTTGTTGTTCAT GATTTTGACATTGATTGTGAACTTTGGGTAAAAATGAGATTAATACCAACAGAACCTTGGGTGGGATCTGCTTCATGGGCTTTTGTTTCTCTTCCAAACA TCAAGTTTGAATTGTCTCCTTTTCGCCGGTTCAATTTAATGACAATTCCAGTGCTCTCAATGTTTTTGATTAAACTTCTTACTGAAGATTTACCCAGACA ATTTGTATACCCTGAGAAAATTGATTTGGATTTCCAAATGGGAAAGACAGTTGGTCCTGTTGCTAACGATGTTAAATCTGGAGAGATGCAAGATGGGAAA AAAAAATATGTTGGCGAACTATCTGTTACCCTTATGAATGCTCGAAAGCTTCCTTATCTCTTCCATGGCAAGACAGATCCTTATGTTATTCTTAGTCTTG GAGATCAAATTATAAGCAGCAAAAAGAACAGCCAGACTACTGTCATTGGGCCTCCTGGAATGCCGATTTGGAATCAAGATTTTCATATGCTTGTTGCAAA CCCGGAAAAGGAGAAGTTACTTGTCCAGGTTAAGGACTCACTTGGGTTTGCAGATTTTACTATAGGTACAGGAGAGGTTGATTTGGGATCTCTTGAAGAC ACTATAGCGGCAGACAGGATTGTGGTTCTGGAAGGAAGTTGGAGAATTTTAAGAAAGGATTGTTACGGGGTGGTATTACTACGGCTAACATATAAAGCAT ACGTGGAGGATGACGAGGATGACGAAGTGGATGAAGATGCCATCAATATAGATTCTTCAGATGATAAGTTGTCTGATTCAGAAGAAGCACATGTCACTGA TAAGAAGAATGAAGGAGATCCTATGCACCGAACTGATAATAAGTCACTTATGGATGTATTGGCAGCATTGGTTGTTAGTGAAGAATTCCAAGGAATAGTA GAATCTGAAACTAAGTCTACCAAGAATTTGGATAATAGTTCAAACACAGGCTCTAAAGTATCAAAATCTCCTGTTTCCAATGCTGAGTCAACTCCTTCTT CTACTATTGATAACTCTGAAGGTTTTGTGGGGTCTGCATTGTTTTGGTTTGCTGTGGTTACTGGCATATCACTACTAACTGCATTCAACATTGGTGGTTC AAGTTACTTCAATCCTTGAGATGGGTTTGTTCTTTATATTCTGCTGATGGAGGATAGCATCTACCTGCTGCACCTGATTTTTTGGCATTTTTCATGTGAG CCACAAAATTTAAAAAGAGAACAAAAAAAAATAATAGATGAGTTTTATAAATTGTCATCCATTCACTGTTTATATGTAATTATTATTATAAAATAATGTA TCTCCTCGTACCAGGATATAATTTATCTCCTCTATTCAATAAAAGTATAACAAATGTACTATTTTC
• Tissue: pods
• Gene name: LI_gene_164596;
• Additional information: details;

Expression of Ll_transcript_285024

FPKM

• PAB: 0.4
• PNAB: 1.6
• PS1: 0.9
• PS2: 0
• PS3: 1.1
• PW1: 1.1
• PW2: 0.2
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_285024

• Blastp: Synaptotagmin-2 from Arabidopsis with 22.86% of identity
• Blastx: Synaptotagmin-2 from Arabidopsis with 23.08% of identity
• Eggnog: Domain-Containing protein(COG5038)
• Kegg: Link to kegg annotations (AT1G20080)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413266.1)
• Pfam: C2 domain (PF00168.29)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;