Ll_transcript_285053

• Id Trinity: TRINITY_DN48860_c2_g5_i1
• Name Transcript: Ll_transcript_285053
• Sequence: CATCACCATCCATTTTTCAAATTTCACAATTTCTTCTCATTAAATAAATTGAACCTTTTAAATAATATCAGAAAAGTACTTTTTTTGTTTGGTTTATTTC AAGTTTGAAGAAAAAATAAGCACTTGCTGAAAGTTGGTTTTGTTGGTGAAGGCTTTCATTTGAAGTAGCCCAACAAAAAAGGTTGCGTTTTTTCAGCTTA TTGCAACAAAGATACACTTTCTGTTTCTTCTTCTCTTCCTTGTTCATAGCCTTCTGGCATCTCAATGATGACACAAGAATCATCATCGGATGAGTTGGAA AGACATGCAAACTCAGGGCATCATGTGAGGGGGAAAGGTGAATATGTTAGACTGGTCATATCAGATGAACCGGGGGCTGTTGAAAATGAAATGCTACAGC CTCAAGCAGAATCAAGACATAATTCTTTCAGGTGGTGGATCAAAGCTTTCTTATGGTGCTTTGTCACTGTTGCAGTTACTCTTCTTCTTCTGAAATGGGG AGTGCCATTTGTTTTTGAAAAGGTTCTTTACCCAATGATGGAGTGGGAATCTACTGCCTTTGGCCGTCCAGCTCTTGCCTTTATACTTGTTGCTTCTCTT GCTTTATTCCCGGTATTCTTCATCCCTTCTGGCCCTTCCATGTGGTTGGCTGGGATGATTTTTGGTTATGGCCTTGGCTTTGTTATAATAATGGTTGGAA CAACCATTGGGATGGTCCTCCCTTACCTTATTGGACTCCTGCTCCGTGACCGCATTCATCAACTGTTAAAGAGATGGCCCCGGAATGCTGAAATGATTAG GCTTGCTGGGGAAGGGAGCTCGTTCCATCAATTTCGAGTGGTTGCTCTGTTTAGAATTTCACCTTTTCCCTATACTATCTTCAATTATGCTGTAGTGGTG ACAAATATGAGGTTTTGGCCCTACTTATGGGGGTCAATAGCTGGAATGGTGCCAGAAGCTTTCCTCTACATCTACAGCGGTCGATTAATAAGGACCTTTG CAGACGCACAGAACGGGAAGCATCATGTGACCACTGTGGAAATTGTGTACAACATTATTTCTTTCATCATTGCAGTTGTTACCATTGTAGCCTTCACTGT CTATGCAAAAAAGACTTTAAATGAACTCAAAGTTGCAGAGGCCAATGAGGAAGTTGCTTCTGTTTCCGGGAATGCTAGTTTTGAGATGCAGAAGTCTTCC CATTGAAAATGCCTCTTATCCAGTTTGTCATGCTAGTGTATATTTTATGTATCTAAAATTTGGTTTAGGACTACATACATGATAGTATTTCCCTCCATTT TCCCTTTCTTTTCCCCTTTATCCCTATGGTGAATTGTTGATCACTGTAATGAGGATGTGGTATAGAAAAGCAAAAGCAGTTACTTGGTTGACCTGAAAAA ACAGTAACATACTAAGCAGTAATAAAAAAAGTAAAGTAACATTTTTTGAAAGAGCAAACTTCTGAGTTATTGTTTCTAGAAAATTTTCACTAGTTTTGTC ATGTCTTAAGGTCAACTTGTTATGATTTTTTTTTTTAAATTAGCTACTGCATGGTGCTCTGCAATAAACTTTATACAATCCAAGTTAGTTAGACAG
• Tissue: pods
• Gene name: LI_gene_164602;
• Additional information: details;

Expression of Ll_transcript_285053

FPKM

• PAB: 10.8
• PNAB: 4.3
• PS1: 7.2
• PS2: 4.4
• PS3: 5.5
• PW1: 2.6
• PW2: 3.1
• PW3: 2.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_285053

• Blastp: TVP38/TMEM64 family membrane protein slr0305 from Synechocystis with 30.1% of identity
• Blastx: TVP38/TMEM64 family membrane protein slr0305 from Synechocystis with 29.95% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (slr0305)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019440065.1)
• Pfam: SNARE associated Golgi protein (PF09335.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;