Ll_transcript_285063

• Id Trinity: TRINITY_DN48860_c2_g5_i2
• Name Transcript: Ll_transcript_285063
• Sequence: GCGCAATGGTAAGGTTGTTTGTCTCGTGGTAAGGTCATGGGTTCCCTTGTAAGGGTGAAGATTGTGCACCCTACCCAGGCTGTACTTGGTCGGAGTATCG CCGTCTTTTTTTGTCTTTGATAGGGTATTTTCATCTGCTTAGCTTGAGAGTAATCCGGGGTTGGGGTGGTGGTGTGGTGGTTAGGCAAAGTTCGACCGGA GTGGCGAGTCCAAAAATTGAATCCCCGATTTCGCAGCTAAAGTTCGCTTGGGGGTGCAATTTACTTACACTCTGACCAGCAACCACTGTTGGTTCATAGC CTTCTGGCATCTCAATGATGACACAAGAATCATCATCGGATGAGTTGGAAAGACATGCAAACTCAGGGCATCATGTGAGGGGGAAAGGTGAATATGTTAG ACTGGTCATATCAGATGAACCGGGGGCTGTTGAAAATGAAATGCTACAGCCTCAAGCAGAATCAAGACATAATTCTTTCAGGTGGTGGATCAAAGCTTTC TTATGGTGCTTTGTCACTGTTGCAGTTACTCTTCTTCTTCTGAAATGGGGAGTGCCATTTGTTTTTGAAAAGGTTCTTTACCCAATGATGGAGTGGGAAT CTACTGCCTTTGGCCGTCCAGCTCTTGCCTTTATACTTGTTGCTTCTCTTGCTTTATTCCCGGTATTCTTCATCCCTTCTGGCCCTTCCATGTGGTTGGC TGGGATGATTTTTGGTTATGGCCTTGGCTTTGTTATAATAATGGTTGGAACAACCATTGGGATGGTCCTCCCTTACCTTATTGGACTCCTGCTCCGTGAC CGCATTCATCAACTGTTAAAGAGATGGCCCCGGAATGCTGAAATGATTAGGCTTGCTGGGGAAGGGAGCTCGTTCCATCAATTTCGAGTGGTTGCTCTGT TTAGAATTTCACCTTTTCCCTATACTATCTTCAATTATGCTGTAGTGGTGACAAATATGAGGTTTTGGCCCTACTTATGGGGGTCAATAGCTGGAATGGT GCCAGAAGCTTTCCTCTACATCTACAGCGGTCGATTAATAAGGACCTTTGCAGACGCACAGAACGGGAAGCATCATGTGACCACTGTGGAAATTGTGTAC AACATTATTTCTTTCATCATTGCAGTTGTTACCATTGTAGCCTTCACTGTCTATGCAAAAAAGACTTTAAATGAACTCAAAGTTGCAGAGGCCAATGAGG AAGTTGCTTCTGTTTCCGGGAATGCTAGTTTTGAGATGCAGAAGTCTTCCCATTGAAAATGCCTCTTATCCAGTTTGTCATGCTAGTGTATATTTTATGT ATCTAAAATTTGGTTTAGGACTACATACATGATAGTATTTCCCTCCATTTTCCCTTTCTTTTCCCCTTTATCCCTATGGTGAATTGTTGATCACTGTAAT GAGGATGTGGTATAGAAAAGCAAAAGCAGTTACTTGGTTGACCTGAAAAAACAGTAACATACTAAGCAGTAATAAAAAAAGTAAAGTAACATTTTTTGAA AGAGCAAACTTCTGAGTTATTGTTTCTAGAAAATTTTCACTAGTTTTGTCATGTCTTAAGGTCAACTTGTTATGATTTTTTTTTTTAAATTAGCTACTGC ATGGTGCTCTGCAATAAACTTTATACAATCCAAGTTAGTTAGACAG
• Tissue: pods
• Gene name: LI_gene_164602;
• Additional information: details;

Expression of Ll_transcript_285063

FPKM

• PAB: 0.6
• PNAB: 0.2
• PS1: 1.4
• PS2: 0.2
• PS3: 0.6
• PW1: 0
• PW2: 0.3
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_285063

• Blastp: TVP38/TMEM64 family membrane protein slr0305 from Synechocystis with 30.1% of identity
• Blastx: TVP38/TMEM64 family membrane protein slr0305 from Synechocystis with 29.95% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (slr0305)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019440065.1)
• Pfam: SNARE associated Golgi protein (PF09335.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;