Ll_transcript_284428

• Id Trinity: TRINITY_DN48862_c4_g2_i1
• Name Transcript: Ll_transcript_284428
• Sequence: GCCATTTCAAGTTTGCTGCAATCAGATATAGCAAAAGCGCGGTTTTGGACAGAACTAACATATAATGGTTGCACGTTGCGGTTGCAACTGGACTTGCAAT GTCATGTTCTAATAGGGATTAGAGATTAGAGACATCATATCTCAATAGGTTGGTGTTCGGATTGTATTCATTCGGAGAGTTTGAATCTTTACTCCGAAGT TCGTGTTGCTAGTATAGAATCTTTTCTTGAAAAAAAATGCTACGAGTTGTCCATAATGTGCAGAATGTTCTATATAAGGAATCCTCCGCCAGTGTCAGAC TACACTTACAGGAATCAGTTGATTATAGAATCTCCCATGTAGTTTTCAGCTTGGTTCCTAGGCAGAGTCATGGGAAGCAACAATGTCTTGGTGGGACAAA ACTTGAACTTACAATGAAAATCCGGCCAACCTCCTGCACGACTAGTATAAGAGCTGCAGCAGAATATCGAGATTTGCCTGATGACGATGATGTTTGTCCG GTTGAATGTGTAAGAGAATTCACTACTGATGAAGAGTTCTGCAGAATTCTGGATAAGGCTAAAAACACTGGATCTTTGGTCGTGGTAGATTTCTTCCGCA CCTCTTGTGGAAGCTGCAAGTATATCGAGCAGGGTTTTGCAAAGCTGTGCAAGAAATCTGGTGACCATGATGCTCCCGTAATCTTTCTAAAGCACAATGT AAGTATGGTATTTGTAGTATTCAGCTCCGTTATATCACATAAAATATTAGTTATATCATAATCCTTTACCTACATAGACTCTTCTTATGTCATTGCTTGC AGGTAATTGATGAGTATGATGAGGAATCCGAGGTTGCTGAGCGACTTAGAATCCGGGTATTTAACTTCTATTCAGTATTAAAACGAGGCTTAATCTATAA AAAAAACTTACTTGCCTCCATATTAGACAGCTAAGCATGTTTTGTTGTCTTTAAAGTTTTTTTATTAGTGTTAATGCCTTCATTTGCATAAAGCCATTGA TTCTGTGTTCTAACTTTATCTGGTCATTTCATTTTTATGTCTGAGACTCAAACTATCTTCTCTTTGTCCACCTCTCTTTTATGGATAATTTATTTATTCC CTATCCACCATTGATATCTGGTTATGCATATAATCATTGGAATTCAGTCTTCATGCATTATGATCTGTAGAATTTGAAATGGAAACAAACCTATGCAGGC AGTGCCACTTTTCCACTTCTACAAAGATGGGGTCTTGTTGGAAGCATTTCCAACCAGAGACAAAGAAAGGATTGTTGCAGCCATCCTCAAGTACTCTTCT CTTGAACCGCAAGATATTCTGAGATAACTTCAGGGATGCTGTCTCGGCATCCTCAGGTACGGGTGCACCGGGAAATTGGTCTATTTGTATATGATAAAGT TGGTCGAACATCATTCTGTATGCTGAAAAAACATAAAGTCCCGAGAGTCTAATTCACTTGATCGGGACATTTACTTTTTAGTTCGTTTTGGAGGGTTCAA TGACTCTATGGAACTTCCCAAGTTTGGTTTCGGATCTTCACTCCTATTGTAAAATAAGACAAATTTTCTCGAGTAAAACAAATTTTATTTAGAAAGAGAA AGCAAATATTATTAAGGACCCATCATGATAGTAGAGTTCACTAGTTACACTTGATTAAATTTATGCACGAGAGCTCCAAATGTCCTATGTGTTCCCCAGT GTTGTTATGATCTCCATTAGACCATTAGACCCTAGTAAGGGCTGGTACCAATCAATAAATAAGAAAAAAGAATGGTCGGGTCTGTGGAGAGTAGACATAT AGTCTTACCCTTGTAATGACTTCTGGATCGTAAGACAAACAACTTTATCATCATAACCGAGATGCTATCTATATGTATGATGTGTCTGTTTTTATTTGAC CAAGAGCTCTTGATGCTAGTAGTTGTATATACTAGAAGGGGAGCCCAGGGATGCCCATGCTTGATATGCTTTATTGATGATTAGGGTTAGTTGGATATAT GTATTGACAAAGCGCTACTTCCTCCAAAATCAATCCAATAGGACAGATCACAGATGAATTTTATGTTTGTCATAAGTGTAGGAATTCTGCTCAATGCAAT GCAGAAAGAGAAACAAATAATTCGAAGATCCCAAAGCTTATTTGGTTGTTTATGTTATACCAAACACATTTTGGTGCTTGTAAATACTAAAAGAGGAGTC GGCGATACTGAATATCAAACTGCAAATGATTTTAGTATGATGAAACCATTAAAGCTATATACTTATTACAATGATTGATAGAAAGATACCAGAGGAACTA AATGCAC
• Tissue: pods
• Gene name: LI_gene_164617;
• Additional information: details;

Expression of Ll_transcript_284428

FPKM

• PAB: 0
• PNAB: 0.2
• PS1: 0.7
• PS2: 0.2
• PS3: 0
• PW1: 0.4
• PW2: 0.2
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_284428

• Blastp: Thioredoxin-like 4, chloroplastic from Arabidopsis with 72.97% of identity
• Blastx: Thioredoxin-like 4, chloroplastic from Oryza sativa with 73.33% of identity
• Eggnog: CCR4-NOT transcription complex subunit 2(COG5601)
• Kegg: Link to kegg annotations (AT1G07700)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019437959.1)
• Pfam: Thioredoxin (PF00085.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;