| Id Trinity | TRINITY_DN48862_c4_g2_i4 |
|---|---|
| Name Transcript | Ll_transcript_284434 |
| Sequence | AAAATATCCGCTAGGGGAGTTAGCCCCACATACCTATGGATGTTCCCGGTTCGGACATGATTGCCTCCGGTGCGAGGATACTTGTGGGAAATCCAAAAAA CTTATTTACTCTCAAAAGACCAGGGTTGCACGTTGCGGTTGCAACTGGACTTGCAATGTCATGTTCTAATAGGGATTAGAGATTAGAGACATCATATCTC AATAGGTTGGTGTTCGGATTGTATTCATTCGGAGAGTTTGAATCTTTACTCCGAAGTTCGTGTTGCTAGTATAGAATCTTTTCTTGAAAAAAAATGCTAC GAGTTGTCCATAATGTGCAGAATGTTCTATATAAGGAATCCTCCGCCAGTGTCAGACTACACTTACAGGAATCAGTTGATTATAGAATCTCCCATGTAGT TTTCAGCTTGGTTCCTAGGCAGAGTCATGGGAAGCAACAATGTCTTGGTGGGACAAAACTTGAACTTACAATGAAAATCCGGCCAACCTCCTGCACGACT AGTATAAGAGCTGCAGCAGAATATCGAGATTTGCCTGATGACGATGATGTTTGTCCGGTTGAATGTGTAAGAGAATTCACTACTGATGAAGAGTTCTGCA GAATTCTGGATAAGGCTAAAAACACTGGATCTTTGGTCGTGGTAGATTTCTTCCGCACCTCTTGTGGAAGCTGCAAGTATATCGAGCAGGGTTTTGCAAA GCTGTGCAAGAAATCTGGTGACCATGATGCTCCCGTAATCTTTCTAAAGCACAATGTAAGTATGGTATTTGTAGTATTCAGCTCCGTTATATCACATAAA ATATTAGTTATATCATAATCCTTTACCTACATAGACTCTTCTTATGTCATTGCTTGCAGGTAATTGATGAGTATGATGAGGAATCCGAGGTTGCTGAGCG ACTTAGAATCCGGGTATTTAACTTCTATTCAGTATTAAAACGAGGCTTAATCTATAAAAAAAACTTACTTGCCTCCATATTAGACAGCTAAGCATGTTTT GTTGTCTTTAAAGTTTTTTTATTAGTGTTAATGCCTTCATTTGCATAAAGCCATTGATTCTGTGTTCTAACTTTATCTGGTCATTTCATTTTTATGTCTG AGACTCAAACTATCTTCTCTTTGTCCACCTCTCTTTTATGGATAATTTATTTATTCCCTATCCACCATTGATATCTGGTTATGCATATAATCATTGGAAT TCAGTCTTCATGCATTATGATCTGTAGAATTTGAAATGGAAACAAACCTATGCAGGCAGTGCCACTTTTCCACTTCTACAAAGATGGGGTCTTGTTGGAA GCATTTCCAACCAGAGACAAAGAAAGGATTGTTGCAGCCATCCTCAAGTACTCTTCTCTTGAACCGCAAGATATTCTGAGATAACTTCAGGGATGCTGTC TCGGCATCCTCAGGTACGGGTGCACCGGGAAATTGGTCTATTTGTATATGATAAAGTTGGTCGAACATCATTCTGTATGCTGAAAAAACATAAAGTCCCG AGAGTCTAATTCACTTGATCGGGACATTTACTTTTTAGTTCGTTTTGGAGGGTTCAATGACTCTATGGAACTTCCCAAGTTTGGTTTCGGATCTTCACTC CTATTGTAAAATAAGACAAATTTTCTCGAGTAAAACAAATTTTATTTAGAAAGAGAAAGCAAATATTATTAAGGACCCATCATGATAGTAGAGTTCACTA GTTACACTTGATTAAATTTATGCACGAGAGCTCCAAATGTCCTATGTGTTCCCCAGTGTTGTTATGATCTCCATTAGACCATTAGACCCTAGTAAGGGCT GGTACCAATCAATAAATAAGAAAAAAGAATGGTCGGGTCTGTGGAGAGTAGACATATAGTCTTACCCTTGTAATGACTTCTGGATCGTAAGACAAACAAC TTTATCATCATAACCGAGATGCTATCTATATGTATGATGTGTCTGTTTTTATTTGACCAAGAGCTCTTGATGCTAGTAGTTGTATATACTAGAAGGGGAG CCCAGGGATGCCCATGCTTGATATGCTTTATTGATGATTAGGGTTAGTTGGATATATGTATTGACAAAGCGCTACTTCCTCCAAAATCAATCCAATAGGA CAGATCACAGATGAATTTTATGTTTGTCATAAGTGTAGGAATTCTGCTCAATGCAATGCAGAAAGAGAAACAAATAATTCGAAGATCCCAAAGCTTATTT GGTTGTTTATGTTATACCAAACACATTTTGGTGCTTGTAAATACTAAAAGAGGAGTCGGCGATACTGAATATCAAACTGCAAATGATTTTAGTATGATGA AACCATTAAAGCTATATACTTATTACAATGATTGATAGAAAGATACCAGAGGAACTAAATGCAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_164617; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_284434
| Blastp | Thioredoxin-like 4, chloroplastic from Arabidopsis with 72.97% of identity |
|---|---|
| Blastx | Thioredoxin-like 4, chloroplastic from Oryza sativa with 73.33% of identity |
| Eggnog | CCR4-NOT transcription complex subunit 2(COG5601) |
| Kegg | Link to kegg annotations (AT1G07700) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019437959.1) |
| Pfam | Thioredoxin (PF00085.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |