Ll_transcript_284435

• Id Trinity: TRINITY_DN48862_c4_g2_i5
• Name Transcript: Ll_transcript_284435
• Sequence: GCCATTTCAAGTTTGCTGCAATCAGATATAGCAAAAGCGCGGTTTTGGACAGAACTAACATATAATGGTTGCACGTTGCGGTTGCAACTGGACTTGCAAT GTCATGTTCTAATAGGGATTAGAGATTAGAGACATCATATCTCAATAGGTTGGTGTTCGGATTGTATTCATTCGGAGAGTTTGAATCTTTACTCCGAAGT TCGTGTTGCTAGTATAGAATCTTTTCTTGAAAAAAAATGCTACGAGTTGTCCATAATGTGCAGAATGTTCTATATAAGGAATCCTCCGCCAGTGTCAGAC TACACTTACAGGAATCAGTTGATTATAGAATCTCCCATGTAGTTTTCAGCTTGGTTCCTAGGCAGAGTCATGGGAAGCAACAATGTCTTGGTGGGACAAA ACTTGAACTTACAATGAAAATCCGGCCAACCTCCTGCACGACTAGTATAAGAGCTGCAGCAGAATATCGAGATTTGCCTGATGACGATGATGTTTGTCCG GTTGAATGTGTAAGAGAATTCACTACTGATGAAGAGTTCTGCAGAATTCTGGATAAGGCTAAAAACACTGGATCTTTGGTCGTGGTAGATTTCTTCCGCA CCTCTTGTGGAAGCTGCAAGTATATCGAGCAGGGTTTTGCAAAGCTGTGCAAGAAATCTGGTGACCATGATGCTCCCGTAATCTTTCTAAAGCACAATGT AATTGATGAGTATGATGAGGAATCCGAGGTTGCTGAGCGACTTAGAATCCGGGCAGTGCCACTTTTCCACTTCTACAAAGATGGGGTCTTGTTGGAAGCA TTTCCAACCAGAGACAAAGAAAGGATTGTTGCAGCCATCCTCAAGTACTCTTCTCTTGAACCGCAAGATATTCTGAGATAACTTCAGGGATGCTGTCTCG GCATCCTCAGGTACGGGTGCACCGGGAAATTGGTCTATTTGTATATGATAAAGTTGGTCGAACATCATTCTGTATGCTGAAAAAACATAAAGTCCCGAGA GTCTAATTCACTTGATCGGGACATTTACTTTTTAGTTCGTTTTGGAGGGTTCAATGACTCTATGGAACTTCCCAAGTTTGGTTTCGGATCTTCACTCCTA TTGTAAAATAAGACAAATTTTCTCGAGTAAAACAAATTTTATTTAGAAAGAGAAAGCAAATATTATTAAGGACCCATCATGATAGTAGAGTTCACTAGTT ACACTTGATTAAATTTATGCACGAGAGCTCCAAATGTCCTATGTGTTCCCCAGTGTTGTTATGATCTCCATTAGACCATTAGACCCTAGTAAGGGCTGGT ACCAATCAATAAATAAGAAAAAAGAATGGTCGGGTCTGTGGAGAGTAGACATATAGTCTTACCCTTGTAATGACTTCTGGATCGTAAGACAAACAACTTT ATCATCATAACCGAGATGCTATCTATATGTATGATGTGTCTGTTTTTATTTGACCAAGAGCTCTTGATGCTAGTAGTTGTATATACTAGAAGGGGAGCCC AGGGATGCCCATGCTTGATATGCTTTATTGATGATTAGGGTTAGTTGGATATATGTATTGACAAAGCGCTACTTCCTCCAAAATCAATCCAATAGGACAG ATCACAGATGAATTTTATGTTTGTCATAAGTGTAGGAATTCTGCTCAATGCAATGCAGAAAGAGAAACAAATAATTCGAAGATCCCAAAGCTTATTTGGT TGTTTATGTTATACCAAACACATTTTGGTGCTTGTAAATACTAAAAGAGGAGTCGGCGATACTGAATATCAAACTGCAAATGATTTTAGTATGATGAAAC CATTAAAGCTATATACTTATTACAATGATTGATAGAAAGATACCAGAGGAACTAAATGCAC
• Tissue: pods
• Gene name: LI_gene_164617;
• Additional information: details;

Expression of Ll_transcript_284435

FPKM

• PAB: 19.2
• PNAB: 16.6
• PS1: 11.6
• PS2: 5
• PS3: 8.5
• PW1: 13.6
• PW2: 19.2
• PW3: 20.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_284435

• Blastp: Thioredoxin-like 4, chloroplastic from Arabidopsis with 77.17% of identity
• Blastx: Thioredoxin-like 4, chloroplastic from Arabidopsis with 78.07% of identity
• Eggnog: CCR4-NOT transcription complex subunit 2(COG5601)
• Kegg: Link to kegg annotations (AT1G07700)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019437959.1)
• Pfam: Thioredoxin (PF00085.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;