Ll_transcript_286113

• Id Trinity: TRINITY_DN48865_c3_g1_i2
• Name Transcript: Ll_transcript_286113
• Sequence: GGAAATGAGCATTTGAGTCTATCTTATCATCTTATGTTCCACAACAACACAAACACAAATACTACCACCTCCATTCCCTTCAAGCACTTTCTGTTTTGTT CAATTTCCACACACGCAATTACCCCATACACCAAATTTGATGCAGTCTCTCTCATTTCCACATTCAGACAAAAACTATCCACACCCAAACTCATCATTTT TTATTTATTTATTATTTCTACCCTTTCATTTTCCTTCACCTCAAATAATAGCATACCAAAATAGTACTAAAACACTATCACTAATCTTGTAATCTTCCAT TTCCTTGCACACCCAAAACCAAAGTTATCACCTTTCTAATTTCCCATATTCTAAAGTCTCCACCTTTATGGATTCGCCGCCGCCGGAGAAGTTACCGTTC TCTGAAGCAGAGAAGATAATACTCCGATGGGACTCCACCGCGTCGGAGGAAGCGCGTGAGAAGATGATCTTCGACGGCGACCGCCACGAAGTCGATCGCT ACCTCCAAGCCGTGGATGAAATCCAACGCTCAATCTCCTCCACCTCCCTCTCCGATGACCAGAACAAAGTCAACTCCGCCGTTCAGATCGCCATGGCTCG CCTCGAAGACGAGTTCCGCAACATCCTCATCTCCCACACAATCCCCATCGAAGCTGATTCCATCACCGAACAAGACCAAGAACAACAACCTCCATCTTCA TCTTCATCTTCTTCTTCTCCGGTGCATCATGAAGCAGCTATTGATAGTAACCATGTTAACGATGAAGCTAACAAGCTCTTTCGTTTTAACAGTGAAGGAA CTGGTTCTAGCGTAAGTGTTAATAGTAGCTACCGTTCAACTAGTAGTATTCGTGAGATCGATCTGATTCCTTCTGAGGTAGTCTATGATCTTCGCTGCAT CGCGGAACGAATGATCTCTTCAGGTTACTTACGTGAATGCATTCAGGTATATGGAAGTGTGAGAAAATCTGCAGTTGATGCTAGTTTTCGAAAACTCGGG ATCGAAAAATTGAGCATTGGTGATGTTCAGAGATTGGAATGGGAGCAGCTTGAAACCAAGATCAGGCGTTGGATTAGAGCTGCTAAGGTTTGTGTTAGAA CCCTTTTCGCGAGTGAGAAGAAGTTATGTGAGCAAATCTTTGATGGGGTTGGGACTTGTATTGATGATGCTTGTTTTATGGAAACTGTGAAAGGTCCTGC TATTCAGCTTTTTAATTTTGCTGAGGCTATTAGTATTAGTAGGAGGTCACCTGAGAAGTTGTTTAAGATTCTTGACCTTCATGATGCTTTGATGGATTTG ATTCCTGATATCGATCTTGTGTTTGATTCTAAGTCATCCGATTCGATTCGGGTTCAGGCAGCCGAGATTCTTTCAAGGTTGGCTGAGGCTGCTAGAGGGA TTTTGTCTGAGTTTGAGAATGCTGTGTTGAGGGAGCCTTCTAAGGTTCCTGTCCCTGGTGGTACAATTCATCCTTTGACTAGGTATGTCATGAATTATAT CAGTTTGATCTCTGATTATAAGATGACTTTGAATGAGCTCATTGTGTCGAAGCCATCCACTGGGTCGAGATATTCAGGTGATCCTTCAACCCCGGATATG GATTTCGAGGAGCTTGAGGGGAAGGCCCCTTTGTCTATTCACTTGATTTGGATTATTGTGATATTGCAGTTTAATTTGGATGTTAAGTCTACGCATTATA AGGACGCTTCTTTGTCTCACCTGTTTATTATGAACAATGTCCACTACATTGTTCAGAAGGTGAGAGGGTCTACTGAATTGAGGGAGATGATTGGTGATGA TTATTTGAGGAAACTTACCGGGAAGTTCCGGCAGGCTGCTACTAGCTACCAGAGAGCAACTTGGGTGAGGGTGTTGTATTGTTTGAGAGATGAAGGGTTG CATGTGAGTGGTGGTTTTTCTTCAGGGGTGTCAAAGAGTGCTTTGCGAGAAAGGTTTAAGGCTTTCAATGCTATGTTTGAAGAGGTTCATAGGACTCAAT GTGTTTGGTTGATACCGGATTCTCAACTCAGGGAAGAGCTCCGAATATCTATATCAGAGAAGCTGATACCGGCATATAGGTCATTTCTCGGCCGCTTCAG GAGTCACATAGAGAGTGGAAGACATCCAGAGAATTACATTAAGTATTCTGTTGAAGACTTGGAGGATGATGTTTTGGATTTTTTTGAAGGAATCCCTGTT TCTCCACACTTGAGGAGGAGATCTAATTGATGGAGTGAAGTTAGTTTTGCAACTTAGAAGCTAGGACACATTCTTTTAATTTTTGCATGGAGCATTCGGG TGATTGGGTGCTGGCCGCATTTCCCTAGCTCTCAAGTGATCCAAGGTTTACCATTCATGATTGTTAGGTCTGTAAGAGATTTTAATCTTGTGAAGAAGAT TGGCGTAGCTTCCTGAATAGCCAAGTAGCTCAGCCTGAACGCTGCTGCCTGTAAGCATGTTATTTGATTTCATACCACATTCTAGATTTTGTTTCATTTG TTTATATTGGAATTTGTTGTACGTGTGTTTTTATTTATCACTCTAAGATTAAAAGGCTTTTTCTTTTGTAGCCTCAAGTGACTCATATACAATTTGATAG TATTGGCACTAATAGATGCATGTTGAAATTGAAATCTTATATCTACTTTGCCTTTTTTGGTAAAAA
• Tissue: pods
• Gene name: LI_gene_164637;
• Additional information: details;

Expression of Ll_transcript_286113

FPKM

• PAB: 1.8
• PNAB: 0.8
• PS1: 0
• PS2: 0.3
• PS3: 0.4
• PW1: 2.3
• PW2: 1.1
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_286113

• Blastp: Exocyst complex component EXO70A1 from Arabidopsis with 35.53% of identity
• Blastx: Exocyst complex component EXO70A1 from Arabidopsis with 40.23% of identity
• Eggnog: exocyst complex(ENOG410YIGI)
• Kegg: Link to kegg annotations (AT5G03540)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461053.1)
• Pfam: Exo70 exocyst complex subunit (PF03081.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;