| Id Trinity | TRINITY_DN48868_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_285350 |
| Sequence | CAAAGATATAACTACAATATATAGCATTTAATGTAAAAAATTATATTGTTAAGCATTCACATCGATCTCATGAAGAAAATAAAGATTCAAATTGTCTCTA AAATTTGGATCAAATTGAGGGAAGTGAAAAATCACAATAACCAATTTATTCCATGAAATAAATTCTAGAGATTGTTGAATGACTTTATTTTGCAATGGCC ATGTTGCCCCAGTAATAAATTTTTTAGATGATTTAGAAAAGTAAGTCCAATTAGGCCCAAATAGAGTCATGTCTTCTTCTTTTGAAAAAACGAGTCACGT GTTCTTCTTCTTCTTCTTCTAATGTTTTGGTATTGCCGTAAAACGACGTCGCATATATTCAAACTTGATGAGTGATTCGTTCAGCTAGTGAGAGATTTGT TTGAAACGACGTCGCTGATTTAGCAGAGATGGGTAATGGCGAGGTTGAAAAGGCGAAGATGAGAGCAAGACCAATTGTGAAGTTGGGGATCTTTCTCATC TCTCATAGTTCATTCGTCAGTGTGATTTGTTTGATAGCAGCGATTGTTGCTCTTCTACTTCTCCCAGTTCTGGCCAAGAACACCTACATTTCCGAAAATG CCCTCATGCCAGGCTCTGCAAACAGCATGTTGTCTACTCAGGATGTCTCTGAGGCAAATAGATTAGTGAAGGACTTGACTCATTTGTATTTGAGATCACC CATGTAACTTCCTTTCGTCTTCCATCTCTTCCGTCATCCGCATTTTCAATTTTTATATTATATGTTACTCTCTTTCGTGATCTGCCTTGTTATGATGCAC AAACACTTCAAAAAGTTGTTGTTTTTAGGTATCCGTATCACACATTTCACTGAGAGTTTTGGATACATGTAATTGTATTTTATAATTTTCTTTTCTATCC AAAAAAAGTTGTATTTTACAACTTCTTTACATTTTGTTATGGATTTTTATACAGTGAAATGCTTGCACAATAATTAGATAAATGTTTGCACTCTATTATG ATTACAATGGTTTATGCTGTCATTTAAGTTATCCCTCTCTTTTAATTTAAAATTTGTGCTCTGATGTTAAACTTAAATTTTATATCTTGTATCATAATTG TGTTGTATCCTATGATTTTTAAAATTTGTGATGTCCTTATGGAGAATCTTTGCTTCCTTGCTGCCCCGGGCTTCTTCTTCATGGCTTCTTTGTAATGCAG TGTATTTGTTCAATATGAGAATTTGATTCATCTGCTGATACGTAGCAGTATGTGTTATCTTTTTTATTCTCCCACTCAATGTTACTGTCCCCTCCTTCAA TGTTGTTAGTGACAGCAGTTAATGAAGTTTTGTTTCCTAAATCCTCTACCCCTTATGTCTTAATATAAAAAGAAAAAAGATACAACATTAGAAGAAAAAG AAATAAAAGATTCACCGTCTTTCAATGCAGTGAAAGTCAACAAATTATTGGGCAGTATATGTCAGGCTTGGATGCTGAAGTTACTTATCAGAAGTTCTAC CCTCAATTAAATCGATTCCATCCGTTGCACTTTTTTACCAATTCTGATTTGGGTATAAGCTCAAGTAACATGAATTGTTCATCACTTGGGATCAACACTG TTGGAATTATTAGAGCACCACGTGGGGATGGCAAGGAAGCTATTGTCTTGGTAACGCCTTATAATCCAGAGAAAAATGGTCTTGGTGAGGCTTTGTCTTT GGGCATTGCGTACTCGGTATTCTCTTTGCTATCACGGGTTACATGGTTGGCAAAGGATATTGTATGGCTTGTAGCTGATTCACGATATGGAGAACATTCT GCGGTGGATGCTTGGCTAAGAGAATATCATGACCCTGTTTTCCATAGAAACAACCTCATTGATAGTGAAACATGCAATGAGAGCAATACTACTACTGAAC TTGAACAGAAGCTTTATGTTGATAAGAAGTTTTACAGTGGTTTTAGACGAGCAGGGACTATGGCTGCGGCCTTAGTGATTAAAGTTGCAGAGGACAGTAA CCATTTTGAAGACAGTCTTAATATTTATGCTGAGGCATCCAATGGGCAGATGCCAAACCTTGACCTTATCAACATCGTAAATTATCTAGCAGTGCATAAA CAAGGTTTACGGATACAAGTAAAGAAGATATGGTCTCTACTTGGCTTCAGGTGGCTCAATACTTTGGGTGTTATATTTGAATCAGTGGGACAAATTGCTA GAAGCATAAATCCTCAATGGAAATTTGGTATTCCTGCTAGTGAATATGTTGAGGGCACTGCTACATTGGCAAGTTCATTGTATTACCAGGCTTTGGGTGT TCCTACTGGTCCTCACGGTGCTTTTCGTGATTATCAAATTGATGCAATTACTCTGGAAATTTCACCAAAAGTTTCTCTTTCTAAAATGACCATGCGCAAT GATTTCATTCTCCGCGGTGGAAGGTTGCTTGAAGGAGTTGTGCAGTCGATAAACAACCTTCTCGAGAAGTTTCATCAGTCATTCTTTTTGTACCTCTTGA CATCCCCTAGTAAGTTTGTGTCAGTCGGAGTTTACATGATTCCATTTGTGTTACTCATCACACCACTTCCACTAGTTGCGGCATCTCTCCACATTGATGC TAGTAAATCCACAACGCCCCAAACCACTGAAGTTGATGTTAGCCGCAAATCTTGGAAATGGCTGAACTCGGCCCGAAAGGTTTTCGTGATTCATTTATGG GGTGTCGTTGTTGCATTACTCCCATATTTCTTATGTCGACTGCCGAATTCCACTCCAACAGCAAACTTTACACTGTGGGGTTTGCTATCAGCTTTTAGCC TCATAATTTTGTACTTGATATTGGGTTCTCCAGTTTTTGAAGCGTCAGCATCTCAACCTGAGAAAAGAGAATGGGCCAGCTTAAAATCGGTAACTACAAC AGCCGCCTTTATCGGCTTGTCTCTCATGTCAGTCATCAACTTTGCTACAGCAGAAATTGGCGCTTTATTTATCATCCCGATATGTCTCATGGTGCAACCA TTGAAGCTCGATGCTCAAGCTAGGAGCCTGATAACTTTGCTAAGGGCCACTTGTAACCTTGTTTTAGGTCTCATTGCATTCCCTCCAGTTGCATATGTTT TATTGAAAGTTGTATTTGATGATGTTGATGGTTTCAATGTTGGTGAGTATTGGAACTGGATGGAATCTCTTTGGGCATGGAACAGTGCTACTTACCTCTA TGTAGGCATTGTTCACCTACCTTGCTGGGCACTGTGCATCCATATTTTATTTCATCCTTGTTGACTTTATACTATTAGTTTGTTAGACAAGCTATTTCAT GCAAGAAATTTATTATCTTGATGTTTATTCTTTTGTCTTTATAATGCATATCATTTTTTTCTGCCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_164664; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_285350
| Blastp | Glycosylphosphatidylinositol anchor attachment 1 protein from Mus with 25.72% of identity |
|---|---|
| Blastx | Glycosylphosphatidylinositol anchor attachment 1 protein from Mus with 25.72% of identity |
| Eggnog | glycosylphosphatidylinositol anchor attachment protein 1 homolog (yeast)(ENOG410XT16) |
| Kegg | Link to kegg annotations (14731) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019442155.1) |
| Pfam | Gaa1-like, GPI transamidase component (PF04114.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |