Ll_transcript_286468

• Id Trinity: TRINITY_DN48872_c1_g2_i4
• Name Transcript: Ll_transcript_286468
• Sequence: GACGAGATAAGATAACTTGAGATGGGGAATTGAGAAAGACAACTCTCCATCTACCAAATAGTATCTTGTATGTTCTGTAGCAGCTTCTTCCTTCCAAGAC AAGGCCATTTCACCAAACCCCAAAATTAAAGAAACACGACCTAATACCTCATCATCAATTCAAGTCTCTTATTCTCTCTTTGAAATGCCTTTCATTTCAT CCTCTATATCTCTATCACTTTTCTTCCTCTTGCTTCAGGTCTTGTTATCAATTCTTTCTCCTTTCCCATGCAGCCTTTTCGCCGTAAGACTCCTCTTTTC AACTCAGAAACCGGAGCAATAATAATGAAGGGCCGAAAGAACAACAATCTCTATATTTTTGTGGTTGTGTTCTCTATATTCCTCTTTGGGATCTTCATGT ATAACGAAGATGTGAAGTCCATTGCTGAGTTCCCATTTTCAAGGCCTAAAGATCAAGAAATCCATGAAGGTGGTGAACCAGAACAAGCTGAGTCTGTTGT TCAAAAGGGTTCTAGGAAAGAAGCATTGGAAGAAGAAAGCTTTACTTTTCAAAGGGATACCAAGAAAGATGTTGAAGAAGAAAGTGCCACAGTAACACTT TCAAAGAAATCAAGAGCTCAACTTGAGAAAAGTCAAGGTGGTGATATCGAAAATTCTGATGAAACACAAGAAGTGATTGGTTTGGAAACTGTTGTGGAGG CAGAGAAGGATAAGAATAAGAAGATTATTGAACTTCCGGTTGTCGAGGAAGAGGAAGAGGAAGAAGAGGAGATTGTTGAGGTGCCACCAGAAGATTGTGA CTTGTTTAATGGTGAATGGGTTTTTGATAACATGTCACATCCTCTGTATAAAGAAGAGCAATGTGAATTCCTTACTTCCCAAGTTACTTGCATAAAAAAT GGAAGACCTGACTCTATGTATCAGAATTGGAGATGGCAGCCCAGAGATTGCTCTTTGCCCAAGTTCAACCCAAGATTGTTGTTCCAGAAGATTAGAGGGA AGAGGCTTATGTTTGTTGGAGACTCACTGAATAGGAATCAGTGGGAATCAATGGTTTGTATGGTTCAGTCAGTGGCTCCTCCAGAGAACAAAACCTGGTA CAAGAATGGTTCTCTAGCTATCTTCAAAATCGAGGTTAACTTTTCTTCTTTTACTACGGTTGTTCAAGTAGGATCAGTCATTTAAATTGCGGCCACAATA CTGCGATATACCGTATATGTCTGATAAGTATTAAATATATCAAACACTTCTGCATCATCATCATTTGCCATAATCATTAACCACATGCATAACATTGTAG TAATACACTAGTTAAATACTGTTCATTTCGGTCTATTTATCATTAGCAATACCGGAGAGGATTCAGACTAGTTATATAATGGGATAACATGGATCAATGC AATATTGCCTAGGAAAATAGCGACTAGTTTGTTGTGTGTTAATGCAGGAACCTAACTACATTACTACAGTGGAGTTTTACTGGGCTCCATTCCTTGTAGA ATCAAATTCAGATGATCCAAACATGCATAGCATATTGAACCGTATAATCATGCCTGAATCTATTGAAAAGCATGGTGTGAATTGGAAGGATGCGGATTAC TTAATCTTTAACACCTATATATGGTGGATGAACACTTTCAAAATGAAAGTCTTACGTGGATCCTTTGATGAAGGGGCCACAGAATACGATGAAATTCCTC GGCCAGAAGCATATAGAAGAGTACTCAAGACATGGTCAAAATGGGTTGATGACAACATTGATCCAAAGAGAACTAAACTTTTCTTCACCAGCACATCCCC TCTTCATATCAAGAGTGAAGATTGGAACAATCCAGATGGAATAAAATGTGCTAGGGAAACCACTCCAATTCTCAACATGTCTGCCCCATTGGATGTAGGC ACAGATCATCGTCTATTTGTGATTTCCCACAATGTGACACAATCAATGAAGGTGCCAGTGTACTTTGTTAACATCACAGCCTTGTCAGAGTTGAGAAAAG ATGCACATACATCTGTTTATACAATACGCCAAGGGAAAATGCTAACTCGAGAACAACAAGCTGACCCAGCTACTTATGCAGATTGTATTCATTGGTGTTT ACCAGGATTGCCTGATACTTGGAATCACTTTCTTTATGCACGTATCATCTCTCAATCTTGACCAACAACATATACATATGTTCATACAATACTTTTGTTT TCTTTTTTCCCTTTTACTTAAATTGTTATTATTTCTACTTCTTGGTCAGTTTGTGCCTAGTTTTTCTATGACTTTGGACATGCCCCATTTATTTCCTCTT ATGTCAATTCAGTAGGAGTCAAAATCACAATAGCAATAATCAATTATCTAGTTAGAAAATCAAATAGATATTTTATACATGTGCTTAAATAATTAAAGGA CATAGTCTTATAGACTAGTTAGTTGGATTTCTTGTTATGCAAGTTACATGGCTTTCCTTCCTTATATAAAAGGAAACATTTCCATTATATTCACACATCA ACC
• Tissue: pods
• Gene name: LI_gene_164706;
• Additional information: details;

Expression of Ll_transcript_286468

FPKM

• PAB: 0
• PNAB: 0.1
• PS1: 0
• PS2: 0.6
• PS3: 0.2
• PW1: 0.2
• PW2: 1.2
• PW3: 5.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_286468

• Blastp: Protein ESKIMO 1 from Arabidopsis with 53.1% of identity
• Blastx: Protein ESKIMO 1 from Arabidopsis with 80% of identity
• Eggnog: expressed protein(ENOG410YA1R)
• Kegg: Link to kegg annotations (AT3G55990)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019455209.1)
• Pfam: PMR5 N terminal Domain (PF14416.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;