| Id Trinity | TRINITY_DN48876_c1_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_284660 |
| Sequence | CTTTATACCAAAAGCATAATGTACTTTTATCTATACCTAATTATATTTTATCAAATAATATAAAGATGTTACTTTTTGTTTTTCTTAAACTACACTTCTC AATGGGATGGGATGAGAAACTAAGACAGAAATGAGTACGATTGATCTCTACTCACATTATGTGGTCCATACCAGTTTGTCACATTCTATATACTTGCCCT TCTTGTTTTTTATATTTATATCTTGGTTTTCTTCTCCTTGACTTCTTCATAGCTATCTGCCCGTCCTCCAATCTCTTTCTCTCTTGATTCTTCTTTCCTT GGAAACTATGGAAGGAAACTGGGCTGAGGGAAAGAAGACATTGGAGTATGAGGATGAAGAAGAGGAAGAGGAAGGGGTGAGTGAGAGAATGAGTTATGGA GAAGAAAGAATGAATAAGAAGAGGGTGGTGAGCACAGATCTCTATAGCAGCAAAAGAGGGTCCAAAGCTGGAGGGTCAGTGCCACCTTCTTGTCAAGTGG ATAGTTGCAAAACTGATCTAAGTGATGCTAAACAGTATCATAGGAGACACAAGGTTTGTGAGTACCATGCCAAAGCTCCTTTTGTTCTCATAGCAGATCA CCAACAAAGGTTTTGCCAGCAATGTAGCAGGTTGAGAAACCCTAATCTACTTTGCTTTTTTTCTTTCTCAACTAGTTATAGTATTTGCATTTTTGTTTTG GTATTTGAAGTACAAGATCTTAAATTGCTGCCTGAAATTGAGTTTGCAATATGTTAGAATTTCGGTATCACGACCATAATTGTAGTTGCATATTCCGTAT TTTTATAATTATAGTCGATACAACTTAGTAGCGACCATGATCATAATTTAAAATTTTATTGAAATTTATTTTTTGATATGAAATGACTGAGGAGAGAAGA GGTTTGATTAGAATTGTGATTATGTACTTGCCTTATCAACTAGCCCTAGCTGTTGTGTACTTTTTTGAAGTTTATATATTGTTATGTAGAACCTAACCCG TCAACAAAAAACTGGTCTTTGAAATTTTGTTCATTTTATTTCCTACCACAGTTATCTAGTGACCTAGAGTCATAAATTACTCTATTAGTAGATACTAATA TTGCTTTTAAGTTGTTGAAAAATCTGCCCAAATGGAAAAATTCTTAGATACAAATGATTATTTACATTACAGTGATTTATGTACTGCGCATTTTGCTTTT ATATATTACAAAAACCATTGATTCCATGTGCTCAGATTCATTCTTATTGCACCAATATTATGCCTGTGGTATGATATATTCATAGATGACCAATAATTGT AGTAAGGCATAGACTCAGCATCTGCCTTCAAGAACATAATAAAGCATAAGCATATTCTGAGTAGCATTTACCAAAATGCCATATTTGGACATTCCACTAT GATTTTAATTTTTTTTAGTTGAATATCAAATTATAAACATTACATTTGATAACTTGTACATTTATCTATATTTTTGTTTTTATTCACATATTTCAAAAGT ATATATAAAAATAGAAGGACAACTTATGGTGTTCTTGTTTTATAGTTCAAGAAACATTACTCTGATTTACATGAAGTTGACAACACAAAGTGTATTATTT GTTTTTGTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_164731; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_284660
| Blastp | Squamosa promoter-binding protein 1 from Antirrhinum with 44.04% of identity |
|---|---|
| Blastx | Squamosa promoter-binding protein 1 from Antirrhinum with 62.71% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019425272.1) |
| Pfam | SBP domain (PF03110.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |