Ll_transcript_284672

Id TrinityTRINITY_DN48876_c2_g1_i3
Name TranscriptLl_transcript_284672
SequenceTTCTATATCCATGTATGTTAACAAATACTCTTCATAATTATCTATTACTAGGTCACGTTCATAATCAGTAGAAAATTTAATGAGTCTATTTCATTTTCAT TATTTGCTTTGTTTTATTTTAATTTCTAATTTTAATTTTTCTTGTCGTTTTCTGAGGAGTTTTGACAATTTATGTTGTTTCTGATTTTTTGTTATGTTGT TGTGGTTGTGCTATCTATGATTTGAGGTTTGGAATCACTGTTTGTTAAAATGGTTGTATCAATTAAATGCAAATGTAGCTTAGATTTTTATTATGTTTGG GTGCTAAACTTGGATTTTGATGTCATGGTGGGTGTTTGTTTCATGTTTCTAGCTTTTCTAGCCCCTGATAGATACTCCATCTATGTTGGGGATGCAATTT TAGGCTTTTGAGTATGAACCTCAAGGACTTGTAGTAGAAATGGCAGCAAGTGGAAGTGAAACTTCGTTTGTCAAAACAAAGAGGACAAATGGTTTCATCG CACTTCTTACAACTGCAGCTTGTGAGTGGTTTTTGATCTTTCTTCTGCTAGTTGATGCCGTGGTGTCGTTTCTGCTCACAAAGTTTGCAAGTTATTGCCA ATTGCAATTGCCTTGTTTGTTATGCTCCAGGCTGGATCATATCTTTGGCTGTGAAAAGCCAGAGTTCTACCAGGACCTATTTTGCAGCAACCATAAATCA GAAATAACTTCTTTGATATCATGTCATATTCATGGTAAAGTTGCAGATGGTCATAGGATGTGTGATGATTGTCTTCTGTCATTCACCATAAGCACCAACC ACAACAAAAAAACTCATAGGTTGTTGGCAGGAAAATTAGGGTTGGTTCTTGGTGGGTCTGGTTTCCAGAGCCCGTCATTGAGCAGAGATTTGTTTACTGC CTCTAAGGGCTCAAGGCCGTGTATCTGCTGTGGTAAGCTTTGGAAGTCAGAACAGAATGCCTCGAGATCTATCCAACTAAAATCATCTGGTAGAGCTGTT CTTAAGCCATACATTCCTTTGCCACATGCACCAAGGCAAAGCCGTTTAAATCACCGGGAGAACTCGAAGAAAGTAAAGGATAAATTTTATGGAACAGAAG GAAAGGGATATTTTCATCATGTTGGGTACACTGAGCTGAGACTCACTTCTGATTCTGAGTCCGAGTTTCTATTTTCTGATGATGATGATAATGTTGGTAA TGTATTTCATGAAAACATTGAAGCTGGTAATGACCCTACAACTCAATTTACACCAGTGATTCCCCCAAAATGTATTCAGGATGATTTTAATCCATCAAAG GTACACGTGGAGCACAACATCAGCAAGCACTATGATGAGAAGTTCCTGGGTTCTGATGCTGCTAATGAAGATGGTCTGGAAGATATTAATTTGCTGCAAG AAAATAAAAGGTCACCTAGTTCTGACCTGCCTGTGCTCATTTCACTTGATGAAGTTTCACCATCACCTATTGCTGTGAACCATTGTAACGATGAATCAGA AGTTGATAAAGCTTCATACCTTTCTCATAATTCTCTTACTAGTCCCTTATCAGCGGAGTTCACGACTTTGGATGGTGCTCATACACTTGTTGGATCATCA TCAAATAAATCTGCAGATGCTGCACTAGCAAGTGGTACCGGACTTGTATCTGAATGTCATGGCGACATCTTAGAGAACATTGATACAAGGGTTGCTTCGA TTGAAACTGATCCCATGATAAGTGATTCTGCTCCTACAAATACAAGTCCTATGCCAAATAACTCAAGTAACATTAGTAAGTCCAATCTCACCTCTATGGA AAGAGAGGTACCTGGTTTTGTCACAGAACAGCCGACTATTCAGGAAATTGTTAAAGTCACAGAAGAACTGGGGCTATCGCCATCACGTAGTACTTCTCCT CACGGGTCTAATATGTCATCAGCAGTTCCCATAAATCATGCTCGTTCCCCTGTGATAGATGATGAGGCTTCCAATTCAAATGCAATTCAGGGTCTTCAAA GGTCGGGCTCAGTGGAATCTGCTCTTGAATCTCTGGATGGATCCAATGTTAGTGAAATTGAAGGGGAGTCTATAGTTGATCGATTGAAGAGACAGGTTGA GCATGACAAGAAATACATGGATTCTTTACAGAAGGAACTAGAGGAAGAAAGAAATGCTTCTGCTATTGCTGCAAATGAAGCAATGTCTATGATAACAAGG TTACAGGAGGAGAAGGCAGCACTGCAAATGGAGACTCTTCAATATTTAAGAATGATGGAAGAGCAAGCAGAATATGACAATGATGAATTGGATAAAGTTA ATGACCTACTGACAGAAAAGGAAAAGGAGATACAAGATTTGGAAGCAGAGCTGGAGTTTTATAGGTTAAACTTGACAGATGACCATGCAGACCACAACAT GCCTGTGGAATGTTGTGATTCAGAAGGAGGAAGTATGACAGCAAAAAATGTTGGTGTCCATAACAGCACTGATACTCTTAACATTGTTTCTGATTTGAAG TTCCCTGAGGTATCCGAAGTCAGTAATGAAGCTGTGCCTTCTGGAACATCTTTAGAATTTGAAGAGGAAAAGCAATATATTTCACAGTGTTTGAAAAACT TGGAAAATAAACTTCATCAAATTTCTTGGAATGGGAGTTCCTCTGATATATACAATGCCAGACCTGAAAAGCTTGAAGTCAGTGAATCAAATGAACTAGG ATATTCTAAAGGTGAAGGTCCTCAATTAGATAGTCACGAAGAGACTGATTTGTCCATACAGAAAAATATTGGTACAAGTAATGGAAACCACACTGATAAG GGTTGCTCAGCTGCTTTAGATAGTGGTGATTGTTCTCTTGGTGAAGAAAACATTAATTCGACATGCGTTGGACAAAAAGATTCACCACCCATGAGAGAAG TTGATTTGGTTGCTCTAGAAAATGAAATATCAGACCTTAATGACAGGTTGGAAGCACTCGAATTTGATCGTGATCTTCTTGAGCATATAATAAACTCTCT TCGAAATGGAGATGGTGGGAAACAATTTATTGAAGATATAGCTCATCAATTGCACGAGCTACGGAAAATTGGGATAAGATCAAAATGCAGACATGTAAAT AATGGTGAGCATACTTTTTTGCCTGGAGGGGTGTTGTTCAATGGTCATAGAAGTTTATGATGCCTTTTACAAATTCTTATTACATATGTATGCAAAGATA AGAATGCAGCACAAGGAGGAAGAAACTTGTAATCTATTGCAAGCAACAGGTAAAAATGACACAGCTTGCTTTATTCTTTTGACGTGACTGCATATTAATG AGAACCAGAGGACAGAATGTGAAGCAATGGGCATCTCTATATATTGCTTTGAATAAGATTATAGAATACATTATATGAATAGTAAACTTTGGCTTTTAGT CTCTTGATCCTTCCCTTCCTTAGGACTCTTGCCCTCTATGTTTTGTGAACTGAATAGAATGTGGAGTTTAGTGTTGGTGTATTGATAAGATGGTACATGA ATGAATTGATATTTTTGTATGTTTGGGTGATGGAAAACACCTCCTCTGTGACACTGAGTGAATTTATCCCCAGCACTGCAAAGATTGATTGAGCTGAAAT CATGACATGTTAGTAATTTTTGAGGATACAATAATTTCTCAATGTTGTCTGTGATCTTATATAAAAACATTTAAAAACTTTAATTTAAAAA BLAST
Tissuepods
Gene nameLI_gene_164733; 
Additional informationdetails; 

Expression of Ll_transcript_284672

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_284672
BlastpProbable myosin-binding protein 4 from Arabidopsis with 46.77% of identity
BlastxProbable myosin-binding protein 4 from Arabidopsis with 42.55% of identity
EggnogPfam:DUF593(ENOG410YFIM)
KeggLink to kegg annotations (AT2G30690)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019441923.1)
PfamZein-binding (PF04576.14)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;