| Id Trinity | TRINITY_DN48883_c2_g1_i19 |
|---|---|
| Name Transcript | Ll_transcript_285777 |
| Sequence | TTAGCGGTGAACAATGACAGGAACGTTGGTATTAAGAATCTCCAGTGGTTGCAAGACTTGGAACATGCTTACTATTGTGTTAACCTGTCATTTAAAACTC ACTGATCGTTTCTGTTGATTTCATTGATCATCGATATCCTTAATTTCTAAACCATGTGAATGTGTTTATTCTATTTTTTATAGCGAAGCGTCTTTGAGGA CATACTTTGCAAAAGAACATGCCATTAAATCAAGCAGTTGCATGTTTCTATCGTGTTTGATAGAAAGATATCAGGAATGTCAAACTTCTGCATGTATGAG GTACAGAATATTGCAGTTCAATTCAAACTCCAATGTTTGAGTACAATATTCCTCTGAAACCATCTATTCTTTTGTAGATCACATATTTGCTTCTGATAAC CTCCACATTAAATCTGAATCTTCATAGAGTGCAGATTGCATAATATATATCCCTAATTCATCTCCGTATTAAGACATCAAATTACTATGATATGTTTATT GAATTACATATTGACTCCACTTATAATATTAAACACACAGATTCTCTACCTTCTCCCTGTGTTCCAAATTAAAAAATTTATCCATGTCTTTTTAAAAAGT AAAATAGTTAGATAACTATCTCTAATTGAAAACTTTCAAAAACAAGTTACGCAGATGATCTTAAGGTGTAAGATGCAAATTCACTACCATCTTCTGATAA AACATATAGCTATGTTGTTACCATGTTGCATTGTTGAAGTTTCAATGTCGGGGATAATTTCTAATTTCATCATTGATTTTTTAATACTCCATTCAGAGAA TCATATATATTAGAGTGTTAAAGACTTCCAAGCAAAATTAGAGGATTTTCATTTATTTTTGGTGAGCATGTATGTTAATGCCTTATGTGACATGTACATT GAAATGAGTTATCTCATTGATAACCCGGTGATGTCATATATTTGGCATTGTTCCCTAGAGTTTTATTACTATATAAATGTTTAGAACTCAGAAGTAATGA GTCAACATTAAGCAGTTCTGTGAGTTGGAGAAATGGGACACATCGTGGCAACTGAACTTGATGATAACAAAGAGTATGCTTTTTGTATAATGTAAACATT TAATGTTGCTACCTAACTATTTGGACTTCATTTGAGGTTTTGTTACAGTGTCTATGTTATCTCTAGTCGAGTTTTACTTTTGCATGCAAATGTATTTTTG GTCTTTACATGTAGCCTAATCTTATTAGCAAACTATTTTGCAATCCAAGTTTAAAAGAGTTGGGGTGAAGAAGAATGACTTGGTAGTTATTATTAAGACT CCAGAAACACTACTATTGAAAAGCTAGTTGTTGATTGGTTGTGGGTGTAGATGATGTTGCTATTAATATGAAGGTTGCTACTATGTGTTAAATGTTAAAT TAAAAACTAAAAGGTGTATACATATCCTTCTATTCTTTGCGTGCTGTGTCATCACTTCTGATTTCGTTTGTGTCAAAACCTTTGTTCTTGTAAGAACTTT TGATAACATGCCAGGCCTGAGTTGAGCTTTCTTGAGGTTTTCAGGTTGAATCTTAGAATTACATTGTTTTTCTTAGATGGGTTCTGCCTATAAATTCTTC TAAACCCTTTCTAGATGGTTAATAATGGAACAATCTTTTGGTTCTATCGCCTTTTATATTTTCTTTTTTCCTACTGTCAGGGTTGTAGTTGTAGAAGTAT CCTTTCTATATACTGGGAAAGGTTGCTTAGTTTTCATCCTCCGATACCTGAGCCTTAACATTGAGGCTCATCTCCATCATGGAATTTTTTTCAGCGACTT CTTACTAATCCCTGGTGCAGTGGAACTCTACATGAATGTGTTCAGTTTCTTGTGCCCAATAGTAGTCATGGCTATGTATGTGTCAACTTGTTGAGTTTCG TGGGTTTCTAACTTCCAAATCCTAAAAATTAAAAGAGGGCTTGCACCCATGTTCTCTGGTATGATTAACAAATAATTGACAAGGCAAGGGGTTTTAGCAA AACATTAATTAAATATTGCCATTGGAGGCAAAATATAGTTTTCACTTTCACTTATCAGAGTCACTTTCTTCCTCTCTTGAAGTTATATTGGAATTTCTGA AATGATAACCACTTTTCTTCTCTTTATCATGCTTGATGCTATGTTTGTGCAGATTTTTTGTGTTCTGTGATGCCATCATGCCAGTTTGTTGTGAGTAATT TTCTAAATATCTGTCTGTAGCTTGAAGATAATATGTGGGATGAGTTTTGTGAAACTGGTGATCATATAGTGCCCCATGCTGGTGACGAACATAAGGACCA GTTTGCAATACAGGGTAATACTGATAGCTGTGAGAAATCACTTCAAGAGTTACAGGGTATCAAAAGATGCAGTGATTGTGTGAGTAACTATGGCACTCAG GGTAAAGAGGATTTGTACTTAGAAAATCTAAACCCAAAAGAAAGAATGCTGGAAAAGATTTCATCATGGCCTCACAAACCTGAAGGTCTGTTTTCTTCAT GTGACGGTGACTCATGCAAAGAATTGAACAGGCTAACATCTGATAATACAAAGATGTTTGATCATTGTTTCAAGGGCAGCAATGTAGATTCTAGCAGTAG CGAGCTTCGTGCAGATGATACTATCATGGGAAACAAGTGTGTGGTGGAGGATGATAGTGTGTCTCAATATTCAATAAATCACATATCTCAAACTGACAAT GAACTCAGTTTTCTTGATAATGATGTTTGGCTGGATATAGGAAACTTTGAAGATGTTGATAGGACGATGAGTTGTGACTTAACTTTTGGAATGGAGAGTT TTGACAATGAAGAGGGGTTCAGCTCTTGGCTCTCGTCTTCACATGGAACTGAAGGACCTGATGATGCATTGAAGTCTGGCTTCAACTTTGCATCTGCCGA AATGTGTCCATTGAAAACCATGTCAGATTATAATATAACCCTGAAGGAAAATATCGAAGGTCTGCCAATTAATGATTGCAACAAAAAAGCATCTCTTATT GATGAAAAACTGAGGTCTCAAATGGATGTTGATCATGATGCTGTCCCTGCTCCACCATCAACGTTCAGTGAATCAGACATGATATCTGGTAATACAGATG CCATGATGCCCAAAGAAAAGGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_164790; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_285777
| Blastp | Protein LNK1 from Arabidopsis with 32.57% of identity |
|---|---|
| Blastx | Protein LNK1 from Arabidopsis with 32.88% of identity |
| Eggnog | NA(ENOG410YS2X) |
| Kegg | Link to kegg annotations (AT5G64170) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019426322.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |