Id Trinity | TRINITY_DN48883_c2_g1_i9 |
---|---|
Name Transcript | Ll_transcript_285765 |
Sequence | GAAACTAAAAACTTGTAATAAGCTACACAAAAGAAGTCTCTGGAATCTCAACTGCAGCGCTGAAACAAACCTTCAAAGCTCACATTCTCTCTCTCTTCGA AATTTCTCATTTTCCCTCAAAAATCGGTTCTGGATTCTATTTTTCTATTTTCAGGTTTATTCTATTTTTTATAGCGAAGCGTCTTTGAGGACATACTTTG CAAAAGAACATGCCATTAAATCAAGCAGTTGCATGTTTCTATCGTGTTTGATAGAAAGATATCAGGAATGTCAAACTTCTGCATGTATGAGGTACAGAAT ATTGCAGTTCAATTCAAACTCCAATGTTTGAGTACAATATTCCTCTGAAACCATCTATTCTTTTGTAGATCACATATTTGCTTCTGATAACCTCCACATT AAATCTGAATCTTCATAGAGTGCAGATTGCATAATATATATCCCTAATTCATCTCCGTATTAAGACATCAAATTACTATGATATGTTTATTGAATTACAT ATTGACTCCACTTATAATATTAAACACACAGATTCTCTACCTTCTCCCTGTGTTCCAAATTAAAAAATTTATCCATGTCTTTTTAAAAAGTAAAATAGTT AGATAACTATCTCTAATTGAAAACTTTCAAAAACAAGTTACGCAGATGATCTTAAGGTGTAAGATGCAAATTCACTACCATCTTCTGATAAAACATATAG CTATGTTGTTACCATGTTGCATTGTTGAAGTTTCAATGTCGGGGATAATTTCTAATTTCATCATTGATTTTTTAATACTCCATTCAGAGAATCATATATA TTAGAGTGTTAAAGACTTCCAAGCAAAATTAGAGGATTTTCATTTATTTTTGGTGAGCATGTATGTTAATGCCTTATGTGACATGTACATTGAAATGAGT TATCTCATTGATAACCCGGTGATGTCATATATTTGGCATTGTTCCCTAGAGTTTTATTACTATATAAATGTTTAGAACTCAGAAGTAATGAGTCAACATT AAGCAGTTCTGTGAGTTGGAGAAATGGGACACATCGTGGCAACTGAACTTGATGATAACAAAGAGTATGCTTTTTGTATAATGTAAACATTTAATGTTGC TACCTAACTATTTGGACTTCATTTGAGGTTTTGTTACAGTGTCTATGTTATCTCTAGTCGAGTTTTACTTTTGCATGCAAATGTATTTTTGGTCTTTACA TGTAGCCTAATCTTATTAGCAAACTATTTTGCAATCCAAGTTTAAAAGAGTTGGGGTGAAGAAGAATGACTTGGTAGTTATTATTAAGACTCCAGAAACA CTACTATTGAAAAGCTAGTTGTTGATTGGTTGTGGGTGTAGATGATGTTGCTATTAATATGAAGGTTGCTACTATGTGTTAAATGTTAAATTAAAAACTA AAAGGTGTATACATATCCTTCTATTCTTTGCGTGCTGTGTCATCACTTCTGATTTCGTTTGTGTCAAAACCTTTGTTCTTGTAAGAACTTTTGATAACAT GCCAGGCCTGAGTTGAGCTTTCTTGAGGTTTTCAGGTTGAATCTTAGAATTACATTGTTTTTCTTAGATGGGTTCTGCCTATAAATTCTTCTAAACCCTT TCTAGATGGTTAATAATGGAACAATCTTTTGGTTCTATCGCCTTTTATATTTTCTTTTTTCCTACTGTCAGGGTTGTAGTTGTAGAAGTATCCTTTCTAT ATACTGGGAAAGGTTGCTTAGTTTTCATCCTCCGATACCTGAGCCTTAACATTGAGGCTCATCTCCATCATGGAATTTTTTTCAGCGACTTCTTACTAAT CCCTGGTGCAGTGGAACTCTACATGAATGTGTTCAGTTTCTTGTGCCCAATAGTAGTCATGGCTATGTATGTGTCAACTTGTTGAGTTTCGTGGGTTTCT AACTTCCAAATCCTAAAAATTAAAAGAGGGCTTGCACCCATGTTCTCTGGTATGATTAACAAATAATTGACAAGGCAAGGGGTTTTAGCAAAACATTAAT TAAATATTGCCATTGGAGGCAAAATATAGTTTTCACTTTCACTTATCAGAGTCACTTTCTTCCTCTCTTGAAGTTATATTGGAATTTCTGAAATGATAAC CACTTTTCTTCTCTTTATCATGCTTGATGCTATGTTTGTGCAGATTTTTTGTGTTCTGTGATGCCATCATGCCAGTTTGTTGTGAGTAATTTTCTAAATA TCTGTCTGTAGCTTGAAGATAATATGTGGGATGAGTTTTGTGAAACTGGTGATCATATAGTGCCCCATGCTGGTGACGAACATAAGGACCAGTTTGCAAT ACAGGGTAATACTGATAGCTGTGAGAAATCACTTCAAGAGTTACAGGGTATCAAAAGATGCAGTGATTGTGTGAGTAACTATGGCACTCAGGGTAAAGAG GATTTGTACTTAGAAAATCTAAACCCAAAAGAAAGAATGCTGGAAAAGATTTCATCATGGCCTCACAAACCTGAAGGTCTGTTTTCTTCATGTGACGGTG ACTCATGCAAAGAATTGAACAGGCTAACATCTGATAATACAAAGATGTTTGATCATTGTTTCAAGGGCAGCAATGTAGATTCTAGCAGTAGCGAGCTTCG TGCAGATGATACTATCATGGGAAACAAGTGTGTGGTGGAGGATGATAGTGTGTCTCAATATTCAATAAATCACATATCTCAAACTGACAATGAACTCAGT TTTCTTGATAATGATGTTTGGCTGGATATAGGAAACTTTGAAGATGTTGATAGGACGATGAGTTGTGACTTAACTTTTGGAATGGAGAGTTTTGACAATG AAGAGGGGTTCAGCTCTTGGCTCTCGTCTTCACATGGAACTGAAGGACCTGATGATGCATTGAAGTCTGGCTTCAACTTTGCATCTGCCGAAATGTGTCC ATTGAAAACCATGTCAGATTATAATATAACCCTGAAGGAAAATATCGAAGGTCTGCCAATTAATGATTGCAACAAAAAAGCATCTCTTATTGATGAAAAA CTGAGGTCTCAAATGGATGTTGATCATGATGCTGTCCCTGCTCCACCATCAACGTTCAGTGAATCAGACATGATATCTGGTAATACAGATGCCATGATGC CCAAAGAAAAGGGâBLAST |
Tissue | pods |
Gene name | LI_gene_164790; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_285765
Blastp | Protein LNK1 from Arabidopsis with 32.57% of identity |
---|---|
Blastx | Protein LNK1 from Arabidopsis with 32.88% of identity |
Eggnog | NA(ENOG410YS2X) |
Kegg | Link to kegg annotations (AT5G64170) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019426322.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |