Ll_transcript_284722

• Id Trinity: TRINITY_DN48886_c2_g1_i1
• Name Transcript: Ll_transcript_284722
• Sequence: CTATGAAATTCCAAATTTTATTGTCAACTTATTAATGCTTTTCCAATACAATTAAGGCTGGAACATTAGAAATTCAAACCTTGAACTGTTACTGATAATT CATTACCACAGTATATATCTGTTACAGCAGTAGATAATAGTATTTCTCCTAGGAAGGTGACCACTTTCATGATCCCTCATTATCACCATTAATGGACATT GAATTTTGAAGCAACAAGAACATTAAAAAATGAAAAATCAAATCAAATAAAATATGAATTTAACTAAATAAAAAATTGAAAACTATTATCATGGTAGACC AGCTGTGACTGTCGGCGAATATCTCTCTCCAAAACTCTTCACTTCATTCACATGCTGTAACATAGTTTTAGAGACAGAGAGTGACCCTTTTGTGTTGTTT GTTTTGTTTTTCAATCTAGCCACAAAGTCATAAACTTTCAATAATCTTCATTGCAATTCAACAACAAAAATCACCATCACCATAATATTATTGTCATGGT ACTATTGGTGAGGGACACTTGAGTGAAGACATAGTGTGAGGCTGAGAAAAAAACCCACATCTTGTTTCTGGTCCTATTTGATTCTATTGCATAAGCAATG TAGAAACAATCTTAAAATCAGAAATGGTTTGATTTTGGTGCTAAAAGTGAGGATTTTGAGAAGTGGGGCATGGTGTGAAACTGTTTGCTAGCAATATCTG TAATTGGGTTTGAAGAATTTTGTGTATTGGTGGATCAAGAGCAATGGAGTCTCGGATGGATCAGTATGAGATCATGGAGCAGATCGGTCGAGGAGCTTTT GGAGCTGCTATTCTTGTTCATCACAAGGCCGAAAAGAAGAAATATGTGTTGAAAAAAATTAGACTTGCAAGGCAGACTGAAAAATGCAGAAGATCTGCAC ATCAAGAGATGGCTCTTATTGCGCGAATCCAGCACCCTTATATTTTGGAATTCAAGGAGGCATGGGTTGAGAAGGGTTGCTATGTCTGCATTGTCACTGG ATACTGTGAAGGTGGAGACATGGCTGAATTGATGAAAAGATCAAATGGTGCTTACTTTCCTGAAGAGAAACTCTGCAAATGGTTCACTCAGATACTCTTA GCAGTAGAATACCTGCATTCAAATTACGTGTTGCATCGTGACCTAAAGTGTTCCAACATCTTTCTTACTAAGGATCAGGATGTTCGCTTGGGGGATTTTG GGCTTGCGAAGACTCTAAAGGCAGATGATCTGGCTTCTTCGGTAGTAGGAACTCCCAATTACATGTGTCCTGAACTGCTTGCAGATATTCCTTATGGATT TAAATCTGATATTTGGTCACTAGGGTGTTGTATATATGAGATGGCTGCTCATCGCCATGCTTTTAAAGCTTTCGATATGGCAGGACTGATAAGCAAGATA AATCGTTCCTCTATTGGCCCTTTGCCTCCATGTTATTCCCCTTCCTTGAAAATACTGATAAAGAGCATGTTGAGAAAAAGTCCTGAGCATCGACCAGCAG CATCTGAGATGTTAAAGCACCCTTATTTGCAGCCCTATGTTGAACAATATCGACCATCTTTCAACCCTCCTCCAATATCCCGTTCTCCTGAAAAACCGAT TTCTTCTGTACATCGTCCTAGAAAAAATATGGCTGAAAGTCAAAACAGTAATAGTTCAAGTAGTGACAAAGATAGTTTGATGTCAAATGAGAGAAACATT GCCACACCAGTGCCAAGGTGTGATAACAAAGGCACTGACACAGACGTTACATCAATAGATGATGATGGCTCAGAGCATCTCTTGCCTTATGAGCAAGAAA GTCACTCTAGCAATGCCAATTCAAATACCAAAACAGTCGAACAAGACTCTAAGAAACCATCTCATAGTGAACAGTGTTCGAATGTTGAGTCTAAGCAGCC AAAAACAGTTAGGAATATAATGATGGCATTAAAAGAGGGAAAGGTTAGAGACACAAATTCTCCAATGAGAGGTAGTCGCATAAAGGCTGGTGGTGTACCA ACACAGAAAATAAATACGGAGGCATTGTCTAGATTGCCTAAGCCTATTTTTGGTTCTCCCGGTTCGAAGCCTAATGTAGAGCCACCAACTGCTGCACTTG CAAGGGCAACCCCTGATTCTGTAAAGCGAATACCTGGTTCACATCCTCCAAAGCATCAGTTACCGATGACAGAATCCACACCAAAAACTAAACCAAGACA TGATTTGACTCCACCATATACTCTCGCCAAACAAGTAGAAGGAGATGGAGTTCCTTCCAAGCCAAGGCTAAGAACTCCTCCAAGCTTACTTAGACGACCT TCATTTCCTGTAATATTGAGGTTGGCTGGGTTTGATGTTCCAAATGCTGCAAATGATACTGGGAAGCTAGGTCCAAATAAAACAGCTCAGGAACCTATGA TAAGCCATTGCCAGTTGACTAATGGCAATGTACCAATTTCGAGACATCCTCGGAACGATTTTGGAAGAAGTTCCAAAGGAATACAAACAGACAGCAGTAA TTCTGCCTCATCTTCAGTCTCTATGCATGGATTTGAACTTTCTGATGATGCAACAACTTTTATTGACTTGAGAGAACAGATACTTCCTGATCATGTGAGT GTAGGTGTGGAATCAAGTCCAGACAGCATGCCACTTGCAACCTGTTCACACGATAAGATGGTTGAACAAGTGTCTGGAGAGACCCTTGAGGCTACCCTGG ATTTTCCAAATAATATTGGCAAAAATGAGAAAGTTAGTCCCAGTTTAACTCTTGATCACCCTGCTGAAGATTCTATTGTGGAAGATGGTCTTCACATAAA TCAGACAACTATATCTGCTGCCTCCGGGCATGGTAATAGATCCGTTGGCCCTCCTGCTGAAGCCACAAAAGAAATCAAAGATCTTGAAGATATTTCTACT GAAATGGTTCTAACCAAGTCTCTCAAACCTCCACTCCAAAATTCTGGAGTTTGTGAAGTTAGTCCAGTAAGTAAGCCTGATCCAGTTGACCAGCCAAAAC TAGTGCGTAACTCATCCGGCGATGACAAATTTACAGTGAAGGAGCGACTGTCAATGGTGGCTGAAACTGCTCCATCGATTATCACTACTGAAATACCAAG CCAGAAAGTTTTGCAAGAGAAAGGAACGTCGTTACAGAATCCAGCACAAGAAAAGCCTGATGCCGGACATCTTCCTCCAGCCTTTGATGATATCATCCAT GTTATACGCCATAGCAGTTACCGCGTTGGGAGTGATCAGCAGCAGCCAGTAAAGGAAACTGTGGAGATGGGAGTTCAGAATCTCGATGTTGGTAAGTTTA TCAACGGTTTGAGGGATGATTTAGAAATGAGAAACACGAGCTCTCCTAAGACCCTTCAATCATCAACTTGCGCTGAAGCTGCAAGCATTAAATCAAATAT TTCTGATCACTGTGAAATGAGAAACACGAACACCCCTGCCACCCTTAAATCTTCAAGCATCTCCAATGCTTTGAGCTCAAAATCGAGTATCGCTGATCAT CCCGATCTTAAGGAACAGGATATGAGTAACCAAGTTTCTTTAGTTTCAGAATCTGACTCTACCGAGTTAAGAAAAAATAACACTCCAGTGATCGAAGAAA AACCGCCAGCATCAAAGGAAATATTGGATGTGAAATCTTTCAGGCAGAGAGCAGAGGCACTCGAAGAGCTTTTAGAATTGTCTGCAGATTTGCTGAAGCA AAATAAATTAGAGGAACTTCAAGTTGTCCTAAAACCTTTCGGAAAAGATAAGGTTTCGCCGAGGGAAACAGCCATTTGGTTAGCCAAGAGTCTTAAAGGA ATGTCATTTGAGGAAAGTGGAGGACGTTGTTCATGAGGTATCTTAATTCTTACATCATAAGTGTGCTTCTGTTTGATGTTTAAATTTACTTCACTAGTTC TAGCTATTCAAGTACCACTTGACTTCCTAAAAGAACAAACTCAGGTTTTATTTGCTGCTTTTTTCTTTCATTATTGTAATTCTTTCAGTGTTTTTGTGCT GTTGTAAATAGTGACCATACAAATTAATAACATCAAGTTAAGATCAATTGTATGGACATTTTGTGCCCCTTCATGTTTTTTCCAGAAGAATTCAATATAT TGAAGTGGTGCGAAGTCAAAGTCAAAAAAGAAAGAGC
• Tissue: pods
• Gene name: LI_gene_164806;
• Additional information: details;

Expression of Ll_transcript_284722

FPKM

• PAB: 0.3
• PNAB: 7.6
• PS1: 2.5
• PS2: 0.7
• PS3: 1.2
• PW1: 12.5
• PW2: 7.7
• PW3: 4.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_284722

• Blastp: Serine/threonine-protein kinase Nek5 from Arabidopsis with 64.43% of identity
• Blastx: Serine/threonine-protein kinase Nek5 from Arabidopsis with 63.64% of identity
• Eggnog: NIMA-related kinase(ENOG410Y7JF)
• Kegg: Link to kegg annotations (AT3G44200)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413189.1)
• Pfam: Protein kinase domain (PF00069.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;