Ll_transcript_284738

• Id Trinity: TRINITY_DN48886_c2_g1_i10
• Name Transcript: Ll_transcript_284738
• Sequence: CTCAAATTTAGATGCCTTCTTCAAATTAAAACTATTTGTTTAAAAGATAGAAAGATTCATGCTCAACATGGTTCTGGGAAGTTTCGACAACATTATTGAG TCCTGCATGGCATCACTGTATGCTATTATGTAGAGCTGCAGATTCAGACTGTTTCATCTTTGAATCATTCCGGTCTCTTTGTCACCCTGTGCGGACACAT GCTACTATACTCTTACTTAGACACCTATTCTAATTCACATATGATCCCTACTTCTTCGGATACTTCTAATTTTCATTCACTAATATTTTATGCGCCACGA GAACCGGAAAGCTTCACTGTTTAAGTTTTTCTTAACTCTATTGGCCAAACCATGGACAAAGAAACTGTATCAATTATGGTTAGTTAAAATCATCCTATTG TTTAGTTTAGTTGTTCCTTCACCCCTTACCACTCACTGATTTGTTATAATTCATGTAAACTAAACTCCTACCAAAGCACTTCTCATCTTAAACCAAATAG AAGCATACAATGGCTGCTGACAAGGGTAACATTGTTTGATACATGAAAAACGTAAATCTGCTTGAATCAAAATTGGCATCAAACTGGACGAGTAGAGCTG CTACTCTATTTATTTTAGTGGGGGAAAACCACAGAGGTAGCCTTGGAAATCCACCAAATATTTTTTCCTATGTTTATCAGCACTTATAATAAACTTTTTC TAGTGCTTCCACTTCTATTATAATTTTTTTAACTTTTTCGTCTGAAGAATATCTTGAGTATCCCCCTAAGATGTGAAATCAGTAATTGCTGTAAATGTTT CAATGCAGGTAGTAGGAACTCCCAATTACATGTGTCCTGAACTGCTTGCAGATATTCCTTATGGATTTAAATCTGATATTTGGTCACTAGGGTGTTGTAT ATATGAGATGGCTGCTCATCGCAATGCTTTTAAAGCTTTTGATATGGCAGGACTGATAAGCAAGATAAACCGTTCCTCTATTGGCCCTTTACCTCCATTT TACCCCCCTTCCTTGAAAATATTGATAAAGAGCATGTTGAGAAAAAGTCCTGAGCATAGACCAACAGCATCTGAGGTGTTAAAGCACCCTTATTTGCAAC CTTACCTTGTTCAATATGGTCCATCTTTCAATCCTCCTCCAATATCCCGTTCTCCTGAAAAACCAATTTCTTCTGTACATCGTCCTCGAAAAAATAAGGC TGAAAGTCAAAACAGTAATAGTTCAAGCAGTGACAAAGATAGTTTGATGTTAAATGAGAAAAATATTAACACAACAATGCCAAAATGTGATAACAAAGGC ACTGACACAGATGCTACATCAATAGATGATGATGGCTCAGAGCATCTCCTGCCTTGTGAGGAAGAAAGTAGCGCTAGCAATACCAATGCAAATACCAAAG CAGTTGAACAAAAGATGATGAAGCCATCTCATAATGGACAGTGTTCTAATATTGATACTAAGCAGCCAAAAACAATTAGGAATATGATGATGGCATTAAA AGAGGAAAAAGTTAGAGAAACAACTTCTCCGATGAGAGGTAGTCGCGTAAAGTCTAGTGGTCTACCAACACAGAAAATAAATACAGAGACATTGTCCAAA TTGCCTAAGCCTATTTTCGGTTCTCCCTGTTCGAAGCCTAATTTAGAGTCACCAACTGCTGCACTTGCAAAGGCAACTCCGGATTCTGAAAAGCGAATAC CGGGTTCACACTCTTCGAAGCATCAGTTACCTTTGACAGAATTCACACCAAAAACTAAACCAAGACATGATTTGACTCCACCACCTGCTCTTATTAAAAA AATAGAAGGAGATGCAGTTCCTGCCAAGCCAAGCATAAGAACTCCTCCGAGCTTACTTAGACAACCTTCATTTCCTGCAAGCATGAGGTTGGCTGGGATT GATGTTCCAAATTCTGCACATGACACTGAAAAGCTATCTCCAAATAAAATAGCTCAGGCGCCTGAGATAACCCGTCGTCAATTGACTAATGGCAGTGTAC CAATTTTTAGACAGCCTCAGAAGGATTTTGGAAGAAGTTCCGAGGGAATGCAAACAGGCAGCAGTAATTCTGGTTCATCTTCTGTCTCTATGCAAGGATT TGAACTTTCTGATGATGCAACAACTTTTATTGACTTGATAGAGCAGGCAATTCCCGATCATGCGAGTGAAGCCGTGGAATCAAGTCCAGAGAGCATGCCA CCTGTAACCTTTTCACATTGTAAGATGGTTGAACAGGTGTCCGGAGAAACCCCTGAGGTTACCCTGAGTTTTCATGATAATATTAGCAAAAATGAGAAAG TTAGTCCCAGTTTGACTCTTGATCACCCCGTTGAAGATTCTAAGGTAGAAGATGGTCTTCATATAAATCAGACTACTATTTCTACATTAAGCAAGTCTGA TATAGATACAGTTAGCCAGCCAAAACTACTGCGTAAATCATCCGGTGATGACAAGTTTACAGTGAGGGAGCGACTGTCTATGGTGGGAGAAACTGCTACA CCGATTACCACTACTAAAATTCCAAGCCAGAAAGTTTTACAAGATAAAGGAAACGTGTCTCAGAAGCCAGCACAAGAAAAGCCAGATTGTGGCCATCTTC CTCCAGCCTTTGACGATGTCATCCATGTTATACGCCATAGCAGTTACCGCGTTGGGAGTGATCAGCAGCAGCCAGTAAAGGAAACTGTGGAGAAGGGAGT TCAAAATGTAGATGTTGGTAAGTTTATCAACAGTTTGAGGGATGATTTAGAAATGAGAAACACGGGCTCTCCTATGACCCTTAAATCTTCATGTTGCTCT GAAGCTGCAAGCATGAAATCAAATATTTCTGATCAGTGTGAAATGAGAAACATGAGCACTCCCACTAGCCTTAAATCCTCAAGTTTCTCTGATGCTCTGA GCTCGGAATCGTGTGTTTCTGATCATCCCGGTCTTAAGGAACAGGATATATGTAACCCTGTTTCCTTAGTTTCAGAATTTGCTTCTACTGAGTTAAGTAA AAATAGCACTCTAGTGACTGAAGAGAAACCACCACAAGCAAAGGAAATATTGGATGTCAAATCTTTCAGGCAGAGAGCAGAGGCACTTGAAGAGCTCTTA GAATTGTCTGCAGATTTGTTGCAGCAAAATAGATTGGAGGAACTTCAAGTTGTTCTAAAGCCCTTTGGGAAAGATAAGGTTTCTCCGAGGGAGACAGCCA TTTGGTTAGCCAAGAGTCTTAAAGGAATGTCATTTGAGGAAAGTGGAGGACGTTGTTCATGAGGTATCTTAATTCTTATATGATAAATATCGTTTGATTT CCTCGGCTGTTTGCAAGTTGAGTTTTAGATGGGAAGGAAAGGAAGACTTCAGAATCATGAAATACACTTGTGAGATGACTCTGAAGTTTATTTTCTTTTC ATTCCGTTCAAAACTCAACTTGCAAACATATCCCAACAAACCAGATTTATTTGCTGTTTTTATCACTTGTTGTAATTCTTTCTGTGTTTTTATGCTGTTG TAAATAGTGACCGTACAAATTAATAAAATCAACTTATGATCAACTGTAAGGACATTTTGTGCGCAGACATATAGTTAAAGATCAATG
• Tissue: pods
• Gene name: LI_gene_164806;
• Additional information: details;

Expression of Ll_transcript_284738

FPKM

• PAB: 0
• PNAB: 0.6
• PS1: 0.2
• PS2: 0
• PS3: 0
• PW1: 0.5
• PW2: 0.5
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_284738

• Blastp: Serine/threonine-protein kinase Nek5 from Arabidopsis with 45.17% of identity
• Blastx: Serine/threonine-protein kinase Nek5 from Arabidopsis with 44.47% of identity
• Eggnog: NIMA-related kinase(ENOG410Y7JF)
• Kegg: Link to kegg annotations (AT3G44200)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448867.1)
• Pfam: Protein kinase domain (PF00069.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;