| Id Trinity | TRINITY_DN48886_c2_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_284724 |
| Sequence | GAAATCTTAAAGATTAAATCGGAGAATGAAAACGATTTGTTTATCGACTAGTTCAATTGTTAGTCCTCTTTCTTTGTGCTGGAAATCTAAGTTGTTGTCT CCTATACCTACAGGAAAATATTGATAAAGAGCATGTTGAGAAAAAGTCCTGAGCATAGACCAACAGCATCTGAGGTGTTAAAGCACCCTTATTTGCAACC TTACCTTGTTCAATATGGTCCATCTTTCAATCCTCCTCCAATATCCCGTTCTCCTGAAAAACCAATTTCTTCTGTACATCGTCCTCGAAAAAATAAGGCT GAAAGTCAAAACAGTAATAGTTCAAGCAGTGACAAAGATAGTTTGATGTTAAATGAGAAAAATATTAACACAACAATGCCAAAATGTGATAACAAAGGCA CTGACACAGATGCTACATCAATAGATGATGATGGCTCAGAGCATCTCCTGCCTTGTGAGGAAGAAAGTAGCGCTAGCAATACCAATGCAAATACCAAAGC AGTTGAACAAAAGATGATGAAGCCATCTCATAATGGACAGTGTTCTAATATTGATACTAAGCAGCCAAAAACAATTAGGAATATGATGATGGCATTAAAA GAGGAAAAAGTTAGAGAAACAACTTCTCCGATGAGAGGTAGTCGCGTAAAGTCTAGTGGTCTACCAACACAGAAAATAAATACAGAGACATTGTCCAAAT TGCCTAAGCCTATTTTCGGTTCTCCCTGTTCGAAGCCTAATTTAGAGTCACCAACTGCTGCACTTGCAAAGGCAACTCCGGATTCTGAAAAGCGAATACC GGGTTCACACTCTTCGAAGCATCAGGTACAATACATTACCATTTGAAATTGTCTGCTACTTTTAAAGATTCTCTCAGAACATTAAATTTATTTCTGGTAT ACTATTTGTACATGCTAGCAGTTACCTTTGACAGAATTCACACCAAAAACTAAACCAAGACATGATTTGACTCCACCACCTGCTCTTATTAAAAAAATAG AAGGAGATGCAGTTCCTGCCAAGCCAAGCATAAGAACTCCTCCGAGCTTACTTAGACAACCTTCATTTCCTGCAAGCATGAGGTTGGCTGGGATTGATGT TCCAAATTCTGCACATGACACTGAAAAGCTATCTCCAAATAAAATAGCTCAGGCGCCTGAGATAACCCGTCGTCAATTGACTAATGGCAGTGTACCAATT TTTAGACAGCCTCAGAAGGATTTTGGAAGAAGTTCCGAGGGAATGCAAACAGGCAGCAGTAATTCTGGTTCATCTTCTGTCTCTATGCAAGGATTTGAAC TTTCTGATGATGCAACAACTTTTATTGACTTGATAGAGCAGGCAATTCCCGATCATGCGAGTGAAGCCGTGGAATCAAGTCCAGAGAGCATGCCACCTGT AACCTTTTCACATTGTAAGATGGTTGAACAGGTGTCCGGAGAAACCCCTGAGGTTACCCTGAGTTTTCATGATAATATTAGCAAAAATGAGAAAGTTAGT CCCAGTTTGACTCTTGATCACCCCGTTGAAGATTCTAAGGTAGAAGATGGTCTTCATATAAATCAGACTACTATTTCTACATTAAGCAAGTCTGATATAG ATACAGTTAGCCAGCCAAAACTACTGCGTAAATCATCCGGTGATGACAAGTTTACAGTGAGGGAGCGACTGTCTATGGTGGGAGAAACTGCTACACCGAT TACCACTACTAAAATTCCAAGCCAGAAAGTTTTACAAGATAAAGGAAACGTGTCTCAGAAGCCAGCACAAGAAAAGCCAGATTGTGGCCATCTTCCTCCA GCCTTTGACGATGTCATCCATGTTATACGCCATAGCAGTTACCGCGTTGGGAGTGATCAGCAGCAGCCAGTAAAGGAAACTGTGGAGAAGGGAGTTCAAA ATGTAGATGTTGGTAAGTTTATCAACAGTTTGAGGGATGATTTAGAAATGAGAAACACGGGCTCTCCTATGACCCTTAAATCTTCATGTTGCTCTGAAGC TGCAAGCATGAAATCAAATATTTCTGATCAGTGTGAAATGAGAAACATGAGCACTCCCACTAGCCTTAAATCCTCAAGTTTCTCTGATGCTCTGAGCTCG GAATCGTGTGTTTCTGATCATCCCGGTCTTAAGGAACAGGATATATGTAACCCTGTTTCCTTAGTTTCAGAATTTGCTTCTACTGAGTTAAGTAAAAATA GCACTCTAGTGACTGAAGAGAAACCACCACAAGCAAAGGAAATATTGGATGTCAAATCTTTCAGGCAGAGAGCAGAGGCACTTGAAGAGCTCTTAGAATT GTCTGCAGATTTGTTGCAGCAAAATAGATTGGAGGAACTTCAAGTTGTTCTAAAGCCCTTTGGGAAAGATAAGGTTTCTCCGAGGGAGACAGCCATTTGG TTAGCCAAGAGTCTTAAAGGAATGTCATTTGAGGAAAGTGGAGGACGTTGTTCATGAGGTATCTTAATTCTTATATGATAAATATCGTTTGATTTCCTCG GCTGTTTGCAAGTTGAGTTTTAGATGGGAAGGAAAGGAAGACTTCAGAATCATGAAATACACTTGTGAGATGACTCTGAAGTTTATTTTCTTTTCATTCC GTTCAAAACTCAACTTGCAAACATATCCCAACAAACCAGATTTATTTGCTGTTTTTATCACTTGTTGTAATTCTTTCTGTGTTTTTATGCTGTTGTAAAT AGTGACCGTACAAATTAATAAAATCAACTTATGATCAACTGTAAGGACATTTTGTGCGCAGACATATAGTTAAAGATCAATG BLAST |
| Tissue | pods |
| Gene name | LI_gene_164806; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_284724
| Blastp | Serine/threonine-protein kinase Nek5 from Arabidopsis with 39.14% of identity |
|---|---|
| Blastx | Serine/threonine-protein kinase Nek5 from Arabidopsis with 38.84% of identity |
| Eggnog | NIMA-related kinase(ENOG410Y7JF) |
| Kegg | Link to kegg annotations (AT3G44200) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019448865.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |