Id Trinity | TRINITY_DN48886_c2_g1_i5 |
---|---|
Name Transcript | Ll_transcript_284732 |
Sequence | CTATGAAATTCCAAATTTTATTGTCAACTTATTAATGCTTTTCCAATACAATTAAGGCTGGAACATTAGAAATTCAAACCTTGAACTGTTACTGATAATT CATTACCACAGTATATATCTGTTACAGCAGTAGATAATAGTATTTCTCCTAGGAAGGTGACCACTTTCATGATCCCTCATTATCACCATTAATGGACATT GAATTTTGAAGCAACAAGAACATTAAAAAATGAAAAATCAAATCAAATAAAATATGAATTTAACTAAATAAAAAATTGAAAACTATTATCATGGTAGACC AGCTGTGACTGTCGGCGAATATCTCTCTCCAAAACTCTTCACTTCATTCACATGCTGTAACATAGTTTTAGAGACAGAGAGTGACCCTTTTGTGTTGTTT GTTTTGTTTTTCAATCTAGCCACAAAGTCATAAACTTTCAATAATCTTCATTGCAATTCAACAACAAAAATCACCATCACCATAATATTATTGTCATGGT ACTATTGGTGAGGGACACTTGAGTGAAGACATAGTGTGAGGCTGAGAAAAAAACCCACATCTTGTTTCTGGTCCTATTTGATTCTATTGCATAAGCAATG TAGAAACAATCTTAAAATCAGAAATGGTTTGATTTTGGTGCTAAAAGTGAGGATTTTGAGAAGTGGGGCATGGTGTGAAACTGTTTGCTAGCAATATCTG TAATTGGGTTTGAAGAATTTTGTGTATTGGTGGATCAAGAGCAATGGAGTCTCGGATGGATCAGTATGAGATCATGGAGCAGATCGGTCGAGGAGCTTTT GGAGCTGCTATTCTTGTTCATCACAAGGCCGAAAAGAAGAAATATGTGTTGAAAAAAATTAGACTTGCAAGGCAGACTGAAAAATGCAGAAGATCTGCAC ATCAAGAGATGGCTCTTATTGCGCGAATCCAGCACCCTTATATTTTGGAATTCAAGGAGGCATGGGTTGAGAAGGGTTGCTATGTCTGCATTGTCACTGG ATACTGTGAAGGTGGAGACATGGCTGAATTGATGAAAAGATCAAATGGTGCTTACTTTCCTGAAGAGAAACTCTGCAAATGGTTCACTCAGATACTCTTA GCAGTAGAATACCTGCATTCAAATTACGTGTTGCATCGTGACCTAAAGTGTTCCAACATCTTTCTTACTAAGGATCAGGATGTTCGCTTGGGGGATTTTG GGCTTGCGAAGACTCTAAAGGCAGATGATCTGGCTTCTTCGGTAGTAGGAACTCCCAATTACATGTGTCCTGAACTGCTTGCAGATATTCCTTATGGATT TAAATCTGATATTTGGTCACTAGGGTGTTGTATATATGAGATGGCTGCTCATCGCAATGCTTTTAAAGCTTTTGATATGGCAGGACTGATAAGCAAGATA AACCGTTCCTCTATTGGCCCTTTACCTCCATTTTACCCCCCTTCCTTGAAAATATTGATAAAGAGCATGTTGAGAAAAAGTCCTGAGCATAGACCAACAG CATCTGAGGTGTTAAAGCACCCTTATTTGCAACCTTACCTTGTTCAATATGGTCCATCTTTCAATCCTCCTCCAATATCCCGTTCTCCTGAAAAACCAAT TTCTTCTGTACATCGTCCTCGAAAAAATAAGGCTGAAAGTCAAAACAGTAATAGTTCAAGCAGTGACAAAGATAGTTTGATGTTAAATGAGAAAAATATT AACACAACAATGCCAAAATGTGATAACAAAGGCACTGACACAGATGCTACATCAATAGATGATGATGGCTCAGAGCATCTCCTGCCTTGTGAGGAAGAAA GTAGCGCTAGCAATACCAATGCAAATACCAAAGCAGTTGAACAAAAGATGATGAAGCCATCTCATAATGGACAGTGTTCTAATATTGATACTAAGCAGCC AAAAACAATTAGGAATATGATGATGGCATTAAAAGAGGAAAAAGTTAGAGAAACAACTTCTCCGATGAGAGGTAGTCGCGTAAAGTCTAGTGGTCTACCA ACACAGAAAATAAATACAGAGACATTGTCCAAATTGCCTAAGCCTATTTTCGGTTCTCCCTGTTCGAAGCCTAATTTAGAGTCACCAACTGCTGCACTTG CAAAGGCAACTCCGGATTCTGAAAAGCGAATACCGGGTTCACACTCTTCGAAGCATCAGGTACAATACATTACCATTTGAAATTGTCTGCTACTTTTAAA GATTCTCTCAGAACATTAAATTTATTTCTGGTATACTATTTGTACATGCTAGCAGTTACCTTTGACAGAATTCACACCAAAAACTAAACCAAGACATGAT TTGACTCCACCACCTGCTCTTATTAAAAAAATAGAAGGAGATGCAGTTCCTGCCAAGCCAAGCATAAGAACTCCTCCGAGCTTACTTAGACAACCTTCAT TTCCTGCAAGCATGAGGTTGGCTGGGATTGATGTTCCAAATTCTGCACATGACACTGAAAAGCTATCTCCAAATAAAATAGCTCAGGCGCCTGAGATAAC CCGTCGTCAATTGACTAATGGCAGTGTACCAATTTTTAGACAGCCTCAGAAGGATTTTGGAAGAAGTTCCGAGGGAATGCAAACAGGCAGCAGTAATTCT GGTTCATCTTCTGTCTCTATGCAAGGATTTGAACTTTCTGATGATGCAACAACTTTTATTGACTTGATAGAGCAGGCAATTCCCGATCATGCGAGTGAAG CCGTGGAATCAAGTCCAGAGAGCATGCCACCTGTAACCTTTTCACATTGTAAGATGGTTGAACAGGTGTCCGGAGAAACCCCTGAGGTTACCCTGAGTTT TCATGATAATATTAGCAAAAATGAGAAAGTTAGTCCCAGTTTGACTCTTGATCACCCCGTTGAAGATTCTAAGGTAGAAGATGGTCTTCATATAAATCAG ACTACTATTTCTACATTAAGCAAGTCTGATATAGATACAGTTAGCCAGCCAAAACTACTGCGTAAATCATCCGGTGATGACAAGTTTACAGTGAGGGAGC GACTGTCTATGGTGGGAGAAACTGCTACACCGATTACCACTACTAAAATTCCAAGCCAGAAAGTTTTACAAGATAAAGGAAACGTGTCTCAGAAGCCAGC ACAAGAAAAGCCAGATTGTGGCCATCTTCCTCCAGCCTTTGACGATGTCATCCATGTTATACGCCATAGCAGTTACCGCGTTGGGAGTGATCAGCAGCAG CCAGTAAAGGAAACTGTGGAGAAGGGAGTTCAAAATGTAGATGTTGGTAAGTTTATCAACAGTTTGAGGGATGATTTAGAAATGAGAAACACGGGCTCTC CTATGACCCTTAAATCTTCATGTTGCTCTGAAGCTGCAAGCATGAAATCAAATATTTCTGATCAGTGTGAAATGAGAAACATGAGCACTCCCACTAGCCT TAAATCCTCAAGTTTCTCTGATGCTCTGAGCTCGGAATCGTGTGTTTCTGATCATCCCGGTCTTAAGGAACAGGATATATGTAACCCTGTTTCCTTAGTT TCAGAATTTGCTTCTACTGAGTTAAGTAAAAATAGCACTCTAGTGACTGAAGAGAAACCACCACAAGCAAAGGAAATATTGGATGTCAAATCTTTCAGGC AGAGAGCAGAGGCACTTGAAGAGCTCTTAGAATTGTCTGCAGATTTGTTGCAGCAAAATAGATTGGAGGAACTTCAAGTTGTTCTAAAGCCCTTTGGGAA AGATAAGGTTTCTCCGAGGGAGACAGCCATTTGGTTAGCCAAGAGTCTTAAAGGAATGTCATTTGAGGAAAGTGGAGGACGTTGTTCATGAGGTATCTTA ATTCTTATATGATAAATATCGTTTGATTTCCTCGGCTGTTTGCAAGTTGAGTTTTAGATGGGAAGGAAAGGAAGACTTCAGAATCATGAAATACACTTGT GAGATGACTCTGAAGTTTATTTTCTTTTCATTCCGTTCAAAACTCAACTTGCAAACATATCCCAACAAACCAGATTTATTTGCTGTTTTTATCACTTGTT GTAATTCTTTCTGTGTTTTTATGCTGTTGTAAATAGTGACCGTACAAATTAATAAAATCAACTTATGATCAACTGTAAGGACATTTTGTGCGCAGACATA TAGTTAAAGATCAATG BLAST |
Tissue | pods |
Gene name | LI_gene_164806; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_284732
Blastp | Serine/threonine-protein kinase Nek5 from Arabidopsis with 39.14% of identity |
---|---|
Blastx | Serine/threonine-protein kinase Nek5 from Arabidopsis with 51.51% of identity |
Eggnog | NIMA-related kinase(ENOG410Y7JF) |
Kegg | Link to kegg annotations (AT3G44200) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019448865.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |