Ll_transcript_284702

• Id Trinity: TRINITY_DN48889_c3_g1_i3
• Name Transcript: Ll_transcript_284702
• Sequence: CTTGTTTGAAACGTGGGAGAAGATATTCTATATACCCATTTAGATTCCTTCTTCTTCTGATAGTAAAGTTTCGTGCTTTGGAAACGTTTCATTGTTATAA GAGGTTCAATTTTGTTGTTGAGAAAGTGGTGAAAGGGAAGGTGGAAATGCAAACAGAGGCTAGGGTTGGTGTGGCGGTGGACGGAGGAGTAAGGAAGTTG GTGCAGCCGCAGAAGAAGCAGGTTGGTACTGTTTCTCAGCTTCTCGCCGGCGGTGTTGCCGGCGCTCTTAGCAAAACCTGTACGGCGCCGCTTGCTAGGC TCACTATCCTCTTTCAGATTCAAGGTATGCATTCAAATGTTGCAACTTTGAGAAAAGCCAGCATGTGGAATGAGGCTTCGCGAATTATCCATGAAGAGGG GTTTAGAGCTTTCTGGAAAGGGAATCTGGTTACTATTGCTCACCGCCTGCCTTATTCTTCTGTTAATTTTTATTCATACGAGCACTACAAGAAGGTTAGT GGCATTACTACTCGGGATATATTTATTTCTGTTAAACTATCTTACCGGGAAAGCTGCATTTGAAGGCAGTCAAGGCACTATTGTTCTCAGATTGATTTAT ATTTAATAGCAGTTTATCTGTTGTGTAGTTATTAAAGATGGTTCCAGGATTGAAAAGTCATAGGGATAAGGCCAGTTCAGACCTTTGCGTACATTTTGTT GGTGGTGGCTTGGCTGGAATAACTGCTTCTACATCTACTTATCCCTTGGATCTTGTAAGAACGAGGCTTGCTGCCCAGGGAAATGTTATCTACTATAGAG GTATCTGGCATGCTCTACAAACAATTGTCAGGGAAGAGGGAGTGCTTGGCCTTTATAAGGGTCTCGGAACTACACTATTGACTGTCGGGCCAAGTATAGC AATCAGCTTCTCGGTATATGAAACATTAAGATCCTTTTGGCAGTCTCATAGATCCGACGATTCAACAGTTGTTGTCAGTCTAGCCTGCGGCAGCCTTTCA GGCATTGCATCATCAACAAGTGAGTGGTTGTAAGGCGTATAGAGAACTTGCATTTTTTATGTTCCTTGTCTCAAATATTCTCGATAATTTTAACTTTGAT GTGCCTTGTCAGGTAAGTAAGTATTCTTGATATGTTGGACATGTGATTTACTTGCCATACAAATGTTTTTTTTTGGCAATTCACAGTTTCACACTTATGG TGTTTCTTGCAATTGTTGTTATGAATATTCTGTTGGTAATTTTACCCTGTTCCTGCATCTGTGGCATCGGAGCACTCAATTTAGGGCTGTCGTATCAAAT GTTTACTAAATGTGCAAATTACAGTTTGGAATCCTTCAGACAAACTATTGAATTTGCTGAACCCAACAACACTAATGAAGTCAATGTCTGTAGTGCTTCA CTATGCTTTTTGATGCAGAGAAAGAGGGTTTGGTGCAGGTACTGTACCAACTATCTAACCAGACTGACCTCTAGAATCAGAGGCGAGGTTGGAGTTGTTA TTTTATCTGGCATTGAGAGCTTAGTAAGGAAGACAAGAAAAAAAAGTCCTTCACCTGTTGTTTCTGTAACTATTATTTTCTAAAGATCTTGCACAGATTT TCTCGAGTTTTATACTATGACACGTCTCCCCAAGCTATGCAGTGGATTACCTCACGAGGTAGCATTACTTGGATGAACCTGTGTCATTCTCTCAGTTACC AAATGTGAGAGGTGCCCTCTTTGAGGTATGCTTCTCACTTAGGCGACCTTCACCTGTTGTTTCGATCGGTATCCAAATCCTTTGGCCCTTGTTGATCTGT TTACAGGGAATCTATTCTTTATTGCTTTCATCATATTCCTAAATGATGGAAAATGCGGTAGCAAAATAGTAGTATGCTGAGGATAGAAGTAAAGAATAAT TCTAAATTCTCCTAGCCAGTCCTCATACAAATCTTTCTACTTACTAAATAAAAAAAGTATGGAATACTTCTTTATTCGCAAAACATTGGATTCGTTACCT TTTCGTTAAATACTTTATTTAGTATTGGGAGAAATTTTAGGATATAGCAAAACACATTATAAATGGGTAGATGAAATCGCCAATTTATAACAAAGGAAAG AGCTGGAGATATTTTCATGGGAGAAAAACCAAATATTATTGATCAGGGGGATTGATCTTTCTTGTATCAAAACTTTATTATATAGACACTAACTACCTTT CTCTAAAGTATTCATGCGTGCAAAACCCTAGTAGCCCATTCATCAATTGCTTCATGCAACTTTTGTACCACCATGCTACAGCAATTACATGTTCAAGTAA GGTTGTTATTGCTTTGCATCTTTCCAGTGCCAATTTTTTTAATGCTTCCATGAGAAGATCCCCCCATAGTTCCTATAATATGTTTGCTGGGGCTATTCTT TAGAGTAGCTTATATAATGTTGCAGGCTTGCAATTTTGTCTGAGACACAGAATCGGCACTATAAGAAACTCTTCTTTTGGTTGCATGGCTTACTTGTTTC AAATGTGGTTACTTTTTTATTTCAACATTGATTTTGGAATTGGTTTGACTTTAGTTGATTTTTCACTATTAGAATTTATGATAGGTAATGAAGACTTATG AACTGTTGTGTAATAAAATCCCATGTCAAAGTGAATCTCTTTTGACTGTTCAACTGATCTGCTATCCTTTATGCAGCAACATTTCCCTTGGATCTTGTGA GGCGAAGGAAGCAATTGGAAGGGGCTTGCGGGCGAGCTCGTGTGTATAACATGGGTCTCTTCGGTGTATTTAGGCAAATAATCCGGACAGAAGGTGCGCG CGGCCTATATAGAGGAATTTTGCCGGAATATTACAAGGTGGTGCCGGGTGTAGGTATTTGTTTTATGACTTATGAGACACTGAAGATGCTTTTAGCAGAT ATTGGTTCTGCATAATTACACCCTTCAACTTTGGAGAATGGTCTACACCTACAAGTAATTTGGATTAAGTTATTCGGTTAGAGTTACATTTACCAAATGA GTTCATTTTATTTAATGGATTCACATGGTGAGCAATTTTGCATGCTGAGGGGATTGCATTTTTGTCTTGTATAGTTTTACTTATACATACAACATTTAAT ATTAGGATGTAATGGTTCTTCAACTCTTGTGAGAGCCTCAAAGGAAAAAGCTTTTCAGAGGCCATTGTTCAATATATCTATGTTTGATCATCATCAGCAA GTGAAGTTGAAGGCTTTGCGGTTGTAATTTCTCAAGAGAGATTATCTTGTGAGGACTAACATGTATTCACCATTTTTGGTAAGAAGTTAATCAATTTCGG GGTGATACCACATATATTTATTAAAATTATTTTAGATTAACATTGCTTGTGTTAATATGAGAACTCTACTTGTACCCCAAAAAATATGAG
• Tissue: pods
• Gene name: LI_gene_164827;
• Additional information: details;

Expression of Ll_transcript_284702

FPKM

• PAB: 0.5
• PNAB: 0.2
• PS1: 0.5
• PS2: 0.4
• PS3: 0.3
• PW1: 0.3
• PW2: 0.6
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_284702

• Blastp: Calcium-binding mitochondrial carrier protein SCaMC-1 from Homo with 37.62% of identity
• Blastx: Mitochondrial substrate carrier family protein B from Dictyostelium with 50% of identity
• Eggnog: Solute carrier family 25 (Mitochondrial carrier(ENOG410XQ4P)
• Kegg: Link to kegg annotations (29957)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_006595883.1)
• Pfam: Mitochondrial carrier protein (PF00153.26)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;