| Id Trinity | TRINITY_DN48889_c3_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_284708 |
| Sequence | CTTGTTTGAAACGTGGGAGAAGATATTCTATATACCCATTTAGATTCCTTCTTCTTCTGATAGTAAAGTTTCGTGCTTTGGAAACGTTTCATTGTTATAA GAGGTTCAATTTTGTTGTTGAGAAAGTGGTGAAAGGGAAGGTGGAAATGCAAACAGAGGCTAGGGTTGGTGTGGCGGTGGACGGAGGAGTAAGGAAGTTG GTGCAGCCGCAGAAGAAGCAGGTTGGTACTGTTTCTCAGCTTCTCGCCGGCGGTGTTGCCGGCGCTCTTAGCAAAACCTGTACGGCGCCGCTTGCTAGGC TCACTATCCTCTTTCAGATTCAAGGTATGCATTCAAATGTTGCAACTTTGAGAAAAGCCAGCATGTGGAATGAGGCTTCGCGAATTATCCATGAAGAGGG GTTTAGAGCTTTCTGGAAAGGGAATCTGGTTACTATTGCTCACCGCCTGCCTTATTCTTCTGTTAATTTTTATTCATACGAGCACTACAAGAAGTTATTA AAGATGGTTCCAGGATTGAAAAGTCATAGGGATAAGGCCAGTTCAGACCTTTGCGTACATTTTGTTGGTGGTGGCTTGGCTGGAATAACTGCTTCTACAT CTACTTATCCCTTGGATCTTGTAAGAACGAGGCTTGCTGCCCAGGGAAATGTTATCTACTATAGAGGTATCTGGCATGCTCTACAAACAATTGTCAGGGA AGAGGGAGTGCTTGGCCTTTATAAGGGTCTCGGAACTACACTATTGACTGTCGGGCCAAGTATAGCAATCAGCTTCTCGGTATATGAAACATTAAGATCC TTTTGGCAGTCTCATAGATCCGACGATTCAACAGTTGTTGTCAGTCTAGCCTGCGGCAGCCTTTCAGGCATTGCATCATCAACAAGTGAGTGGTTGTAAG GCGTATAGAGAACTTGCATTTTTTATGTTCCTTGTCTCAAATATTCTCGATAATTTTAACTTTGATGTGCCTTGTCAGGTAAGTAAGTATTCTTGATATG TTGGACATGTGATTTACTTGCCATACAAATGTTTTTTTTTGGCAATTCACAGTTTCACACTTATGGTGTTTCTTGCAATTGTTGTTATGAATATTCTGTT GGTAATTTTACCCTGTTCCTGCATCTGTGGCATCGGAGCACTCAATTTAGGGCTGTCGTATCAAATGTTTACTAAATGTGCAAATTACAGTTTGGAATCC TTCAGACAAACTATTGAATTTGCTGAACCCAACAACACTAATGAAGTCAATGTCTGTAGTGCTTCACTATGCTTTTTGATGCAGAGAAAGAGGGTTTGGT GCAGGTACTGTACCAACTATCTAACCAGACTGACCTCTAGAATCAGAGGCGAGGTTGGAGTTGTTATTTTATCTGGCATTGAGAGCTTAGTAAGGAAGAC AAGAAAAAAAAGTCCTTCACCTGTTGTTTCTGTAACTATTATTTTCTAAAGATCTTGCACAGATTTTCTCGAGTTTTATACTATGACACGTCTCCCCAAG CTATGCAGTGGATTACCTCACGAGGTAGCATTACTTGGATGAACCTGTGTCATTCTCTCAGTTACCAAATGTGAGAGGTGCCCTCTTTGAGGTATGCTTC TCACTTAGGCGACCTTCACCTGTTGTTTCGATCGGTATCCAAATCCTTTGGCCCTTGTTGATCTGTTTACAGGGAATCTATTCTTTATTGCTTTCATCAT ATTCCTAAATGATGGAAAATGCGGTAGCAAAATAGTAGTATGCTGAGGATAGAAGTAAAGAATAATTCTAAATTCTCCTAGCCAGTCCTCATACAAATCT TTCTACTTACTAAATAAAAAAAGTATGGAATACTTCTTTATTCGCAAAACATTGGATTCGTTACCTTTTCGTTAAATACTTTATTTAGTATTGGGAGAAA TTTTAGGATATAGCAAAACACATTATAAATGGGTAGATGAAATCGCCAATTTATAACAAAGGAAAGAGCTGGAGATATTTTCATGGGAGAAAAACCAAAT ATTATTGATCAGGGGGATTGATCTTTCTTGTATCAAAACTTTATTATATAGACACTAACTACCTTTCTCTAAAGTATTCATGCGTGCAAAACCCTAGTAG CCCATTCATCAATTGCTTCATGCAACTTTTGTACCACCATGCTACAGCAATTACATGTTCAAGTAAGGTTGTTATTGCTTTGCATCTTTCCAGTGCCAAT TTTTTTAATGCTTCCATGAGAAGATCCCCCCATAGTTCCTATAATATGTTTGCTGGGGCTATTCTTTAGAGTAGCTTATATAATGTTGCAGGCTTGCAAT TTTGTCTGAGACACAGAATCGGCACTATAAGAAACTCTTCTTTTGGTTGCATGGCTTACTTGTTTCAAATGTGGTTACTTTTTTATTTCAACATTGATTT TGGAATTGGTTTGACTTTAGTTGATTTTTCACTATTAGAATTTATGATAGGTAATGAAGACTTATGAACTGTTGTGTAATAAAATCCCATGTCAAAGTGA ATCTCTTTTGACTGTTCAACTGATCTGCTATCCTTTATGCAGCAACATTTCCCTTGGATCTTGTGAGGCGAAGGAAGCAATTGGAAGGGGCTTGCGGGCG AGCTCGTGTGTATAACATGGGTCTCTTCGGTGTATTTAGGCAAATAATCCGGACAGAAGGTGCGCGCGGCCTATATAGAGGAATTTTGCCGGAATATTAC AAGGTGGTGCCGGGTGTAGGTATTTGTTTTATGACTTATGAGACACTGAAGATGCTTTTAGCAGATATTGGTTCTGCATAATTACACCCTTCAACTTTGG AGAATGGTCTACACCTACAAGTAATTTGGATTAAGTTATTCGGTTAGAGTTACATTTACCAAATGAGTTCATTTTATTTAATGGATTCACATGGTGAGCA ATTTTGCATGCTGAGGGGATTGCATTTTTGTCTTGTATAGTTTTACTTATACATACAACATTTAATATTAGGATGTAATGGTTCTTCAACTCTTGTGAGA GCCTCAAAGGAAAAAGCTTTTCAGAGGCCATTGTTCAATATATCTATGTTTGATCATCATCAGCAAGTGAAGTTGAAGGCTTTGCGGTTGTAATTTCTCA AGAGAGATTATCTTGTGAGGACTAACATGTATTCACCATTTTTGGTAAGAAGTTAATCAATTTCGGGGTGATACCACATATATTTATTAAAATTATTTTA GATTAACATTGCTTGTGTTAATATGAGAACTCTACTTGTACCCCAAAAAATATGAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_164827; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_284708
| Blastp | Mitochondrial substrate carrier family protein B from Dictyostelium with 40.64% of identity |
|---|---|
| Blastx | Calcium-binding mitochondrial carrier protein SCaMC-1 from Silurana with 37.09% of identity |
| Eggnog | Solute carrier family 25(ENOG410ZRF1) |
| Kegg | Link to kegg annotations (DDB_G0285599) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019433219.1) |
| Pfam | Mitochondrial carrier protein (PF00153.26) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |