Ll_transcript_286555

• Id Trinity: TRINITY_DN48891_c0_g1_i9
• Name Transcript: Ll_transcript_286555
• Sequence: AGAAAAGAAGCTTTGCAAGTTTACTGTAAATATGGAAATCATATTTGAAGACCACTAACAATTAAGAATGGTGATTTCTTTAAGAAATTATCACTAGATT TGAAAAAAGTTATGTACACATTTTTTAGTTTATATTTATAGTGTAATGTTTCAGGCTTGAGGAAAATAAGACGCTTGTCCTTACTCCATTTGAGAAAAAT ATTGATATCTGGAGACAGCTCTGGCGGGTTGTGGAGCGCAGTGATTTGCTTGTTATGGTCGTTGATTCGCGGGATCCTCTGTTCTATCGCTGTCCTGATC TTGAGGCTTATGCACGGGAGGTTGATGAGCATAAACACACGTTACTTTTGGTTAATAAGGCAGATCTTTTACCTGAATCTATCAGAGAGAACTGGGCAGA ATATTTTCGTGCTCATGATATTCTTTTCATCTTCTGGTCAGCTAAAGCTGCTACTGCTGCTCTGGAAGGCAAGAAGCTTGCTTCATCATGGGAGGCTGAT AACTCGGGGAGAACCAATAACCCAGACACAAAGATATATGGAAGGGATGAGCTTTTAGCCCGCTTGCAATCAGAGGCAGAAGAGATAGTTGAAAGGAGGA GAAATTCGGGCTCCTATGACACAAAGCATTCTGAGGTTAAATCTCCTCACGAAAATGCTGCTGGTAGTTCATCATCAAGTAATGTAATTGTGGGATTTGT TGGGTACCCTAATGTTGGGAAAAGTTCAACTATTAATGCTCTGGTTGGTCAAAAGCGGACTGGTGTCACCTCTACTCCAGGGAAAACAAAGCATTTCCAG ACATTAATTATTTCTGACAGGCTCACCCTTTGTGACTGTCCTGGGTTAGTTTTTCCATCTTTCTCAAGCTCAAGATATGAGATGATTGCTTCTGGAGTGT TGCCTATTGATAGGATGACTGAACACAGGGAATCTATCCAAGTTGTAGCTGACAGAGTCCCAAGACATGTCATCGAGTCAACTTATAAGATCAAACTTCC TAAACCTAGGCCATATGAGTCCCAATCTCGTCCCCCTCTGGCATCTGAACTTCTGAGAGCATATTGTGCTTCTCGTGGGCATGTTGCCTCCAGCGGACTT CCTGATGAAACCAGAGCTTCCCGTCAGATTCTGAAAGATTACATTGATGGGAAGCTGCCTCACTATGCAATGGCCCCTGCCGCGTCGAATGAGGAACTTG CTGTAGAAGATCCTGCAGGGCGTGACTCCTCAGATAAGTTGCATGAGCCAGATTCATCTGGTATTGAAGAT
• Tissue: pods
• Gene name: LI_gene_164839;
• Additional information: details;

Expression of Ll_transcript_286555

FPKM

• PAB: 0.4
• PNAB: 0
• PS1: 0
• PS2: 0.8
• PS3: 0.9
• PW1: 0.5
• PW2: 0.2
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_286555

• Blastp: GTPase LSG1-2 from Arabidopsis with 68.33% of identity
• Blastx: GTPase LSG1-2 from Arabidopsis with 69.79% of identity
• Eggnog: Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity (By similarity)(COG1161)
• Kegg: Link to kegg annotations (AT1G08410)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019453828.1)
• Pfam: 50S ribosome-binding GTPase (PF01926.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;