| Id Trinity | TRINITY_DN48894_c0_g2_i4 |
|---|---|
| Name Transcript | Ll_transcript_284856 |
| Sequence | CAGATTAAATTCCAAGTATTGAGTTATATTTTCAACACCTATTATTCACTGTTCACCATGTCCAACACTTTCTTTGTCTTTATTGCTGTGCCCTCTATGT TATCTTATTGGTTTTGAGTTTCTAATAATGTCATTGAAACTTCACTCTTTCAAAATCAAATCTCATTCACCAACAAATGGCTTCCTTTGAAGAACTTCCT CAATCACAAGATAAAAAACCACTTTCTTCATATATATGCCATGATCCAAAAAGCCTTGGTTCCTCAAGGAACAAGGTAGAGAAAGACAAAAATGGTTCTT CTTCATCTCAATTCAAAAGGGTTGCTTTATCTTCAGAAAGATCAAATTCTAAGTCATTGGTGTCAGCAGATTCAAGAACTTTTGCAGGACCCCTTATGGA TGAAGTTGCTATTAGAGCAGTGATTGCTATCCTTAGTGGATACATTGGAAGATATGTAAAAGATGAACATTTCAGGAGAACAATCAGAGAGAAGTGTAAT TCTGTGTTGGAGAGAAGAATAAAGGACTCAAGTGATGATGAGTTTTTTGTGAACATGGAACTTGGTATGGAAAAAGTTGATAGATTAGTAGAAGATCAAG GGACTAAGAAACATGTCAAAAATTTGAGAAACTCCATTGAGATTTTAACCATTGTTGCATCTTTGAATTCTAAAACTTCCAAGGATGCTTCAACTTGGGG TGTATCCTATTCCAATCTTTCTGCTTGTGCTGAATTGTATTTGGCAATAGCTTACAAGCTGCAGAAAAATGAAAGGGTTTCATCTAAGCATTTACTTCAA GTGTTTGGTGATTCTCCATGTTTGGCTAGAACCTATTTGCTACCTGATCTTTGGGAGCATTTTTTTCTTCCACATCTTCTCCATATCAAAATATGGTATA ACAATGAGCTTGAGTTCCTATCAAATGAAGAGCATGTTGTGAAGAAAAAGAAAATAAAGGTATTGAGCAAAGTATACAATGAAAAAATGGATACTGGAAC TACTTTGTTTGCTTTGTACTACAAGCAATGGCTTAAAGTTGGGGCTAGTGAGCCTCCTTTTCCTATTGTCTCCTTGCCATCAAGACCAAGTTATAGGTCA TCAAGAAGAATGTCTTCCGATTCGTCCTTTTCAAATTCCTCCATCAACCCAAACTTATACAAAGCAGTGTTTGGCCCCCAACTAGAGCAGCAACCTTCTG GTCTTGGTGAACAGAATGGAGTGTTGACAATTAGTACATGCTCCGGGACTGATGAAAAACTGTGTGGAGATGAATATCTTTGCAATTCTATTCAGAAAGA AGACAATATATATCCTGGAAGATGTTCAAGTCAAATCGACATGAGTCATTCTCGAATATGGCCTGAGTCACAGAAATTGGACTATTCGCAGTGGTTTTCT TGCAGGACCATACCAAAAGAAAGCTTCACGAACAGCAACTATACATCGAAGAATGCTTTGATTAGACAAGAAACCAGTGTTTTTTCAAGTGATTTTGTTG GAGCTATTAGAACTTTATGTTCATCGGATATTCTAAGAGAATGTGAGTTTGCGATTCGTGTGATTACCAAAGCTTTGTTGAACTCTCCTGGTGATCCTCT CATTGAAGAAGCACTGACACAAACTAGCGTAATTGAAGCTATTATAGAGGTGTTATTTGCCTCAACTGAGGATGATGTTCTAGAATTGATTATATCAATT TTAGCAGAATTAATCGGAAAGAATAATGCAATTGGTGAAATTCTACTGAACTCTGATCCTCAACTAGAAATATTTGTGAGACTTCTAAGAAGCAGTAGTC TGTTTCTGAAAGCTGCAGTTCTGCTTTATCTATCAAAGCCACAGGCAAAACAGATGTTATCATCAGAATGGGTACCACTAGTACTTCGAGTGTTGGAATT CGGAGACAAATTGCAGACCCTATTCACAATACAGTGCAGTCCTCAAGTGGCAGCATATTACTTCTTGGACCAACTTCTTACTGGTTTCGACGAAGATAAG AATTTAGAGAACGCTAGGCAAGTTCTTTCACTCGGGGGATTGACCCTGCTAATGAGAAGAATTGAAGAAGGAAAGTTTCATGAGAAATATAATGCTTCTT TTATAATTTTGTGTTGCATTCAAGCCGAAGGAAGCTGTAGAAGTTTTTTAGCTGATAATATAAATAAGACTTCTTTGTTGGAACTCATTGTTCATGGAAA TAAACAAAATTCCAGTGGCTATGCCTTTTCTGTGCTAGTTGAGTTGCTCTTTCTTGATAGAAGAACCAAGATTTTAAACTTCTTAAGAGGGATTAAAGAT GGATGGGCTGGCTTAAACATAATGCACATTTTCTTCATTTACCTTCAGAAGGCTCCACCCGAAGAACGCCCCTTCGTTGCAGTGATATTATTGCTGCTTG ATCATATGTTGTGTTGCAGGAAGATCCTTTGAAGGGAAGTTTATATAGAGAAGAAGCAATTGATGCAATTGTAGCCACTTTAAATAATCAAATATGTAAT GATAGAGTTCAGGAGCAATCAGCCAAAGCTCTACTCTTATTAGGAGGCCACTTTTCTTGCAGAGGAGAATCACTAATGGAAAAATGGCTTTTACAACAAG CCGGTTTTCGAGAAATTTCCTTAGAAGATTCATTTCCCGGCAACGAAATTATTGTTCATGATGCACTCTTCAATGTAAGCCTTAGCTAATAACTATGATT ATGTTTTATGTCATGTCTAAATTGCATTTCTTTACTTTTCACAATAGAACATGCTTCTAGTACTAGTGCTATCTTTTTTAAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_164853; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_284856
| Blastp | Putative E3 ubiquitin-protein ligase LIN-2 from Lotus with 32.35% of identity |
|---|---|
| Blastx | Putative E3 ubiquitin-protein ligase LIN-2 from Lotus with 31.76% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419626.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |