Ll_transcript_284861

• Id Trinity: TRINITY_DN48894_c0_g2_i6
• Name Transcript: Ll_transcript_284861
• Sequence: CAGATTAAATTCCAAGTATTGAGTTATATTTTCAACACCTATTATTCACTGTTCACCATGTCCAACACTTTCTTTGTCTTTATTGCTGTGCCCTCTATGT TATCTTATTGGTTTTGAGTTTCTAATAATGTCATTGAAACTTCACTCTTTCAAAATCAAATCTCATTCACCAACAAATGGCTTCCTTTGAAGAACTTCCT CAATCACAAGATAAAAAACCACTTTCTTCATATATATGCCATGATCCAAAAAGCCTTGGTTCCTCAAGGAACAAGGTAGAGAAAGACAAAAATGGTTCTT CTTCATCTCAATTCAAAAGGGTTGCTTTATCTTCAGAAAGATCAAATTCTAAGTCATTGGTGTCAGCAGATTCAAGAACTTTTGCAGGACCCCTTATGGA TGAAGTTGCTATTAGAGCAGTGATTGCTATCCTTAGTGGATACATTGGAAGATATGTAAAAGATGAACATTTCAGGAGAACAATCAGAGAGAAGTGTAAT TCTGTGTTGGAGAGAAGAATAAAGGACTCAAGTGATGATGAGTTTTTTGTGAACATGGAACTTGGTATGGAAAAAGTTGATAGATTAGTAGAAGATCAAG GGACTAAGAAACATGTCAAAAATTTGAGAAACTCCATTGAGATTTTAACCATTGTTGCATCTTTGAATTCTAAAACTTCCAAGGATGCTTCAACTTGGGG TGTATCCTATTCCAATCTTTCTGCTTGTGCTGAATTGTATTTGGCAATAGCTTACAAGCTGCAGAAAAATGAAAGGGTTTCATCTAAGCATTTACTTCAA GTGTTTGGTGATTCTCCATGTTTGGCTAGAACCTATTTGCTACCTGATCTTTGGGAGCATTTTTTTCTTCCACATCTTCTCCATATCAAAATATGGTATA ACAATGAGCTTGAGTTCCTATCAAATGAAGAGCATGTTGTGAAGAAAAAGAAAATAAAGGTATTGAGCAAAGTATACAATGAAAAAATGGATACTGGAAC TACTTTGTTTGCTTTGTACTACAAGCAATGGCTTAAAGTTGGGGCTAGTGAGCCTCCTTTTCCTATTGTCTCCTTGCCATCAAGACCAAGTTATAGGTCA TCAAGAAGAATGTCTTCCGATTCGTCCTTTTCAAATTCCTCCATCAACCCAAACTTATACAAAGCAGTGTTTGGCCCCCAACTAGAGCAGCAACCTTCTG GTCTTGGTGAACAGAATGGAGTGTTGACAATTAGTACATGCTCCGGGACTGATGAAAAACTGTGTGGAGATGAATATCTTTGCAATTCTATTCAGAAAGA AGACAATATATATCCTGGAAGATGTTCAAGTCAAATCGACATGAGTCATTCTCGAATATGGCCTGAGTCACAGAAATTGGACTATTCGCAGTGGTTTTCT TGCAGGACCATACCAAAAGAAAGCTTCACGAACAGCAACTATACATCGAAGAATGCTTTGATTAGACAAGAAACCAGTGTTTTTTCAAGTGATTTTGTTG GAGCTATTAGAACTTTATGTTCATCGGATATTCTAAGAGAATGTGAGTTTGCGATTCGTGTGATTACCAAAGCTTTGTTGAACTCTCCTGGTGATCCTCT CATTGAAGAAGCACTGACACAAACTAGCGTAATTGAAGCTATTATAGAGGTGTTATTTGCCTCAACTGAGGATGATGTTCTAGAATTGATTATATCAATT TTAGCAGAATTAATCGGAAAGAATAATGCAATTGGTGAAATTCTACTGAACTCTGATCCTCAACTAGAAATATTTGTGAGACTTCTAAGAAGCAGTAGTC TGTTTCTGAAAGCTGCAGTTCTGCTTTATCTATCAAAGCCACAGGCAAAACAGATGTTATCATCAGAATGGGTACCACTAGTACTTCGAGTGTTGGAATT CGGAGACAAATTGCAGACCCTATTCACAATACAGTGCAGTCCTCAAGTGGCAGCATATTACTTCTTGGACCAACTTCTTACTGGTTTCGACGAAGATAAG AATTTAGAGAACGCTAGGCAAGTTCTTTCACTCGGGGGATTGACCCTGCTAATGAGAAGAATTGAAGAAGGAAAGTTTCATGAGAAATATAATGCTTCTT TTATAATTTTGTGTTGCATTCAAGCCGAAGGAAGCTGTAGAAGTTTTTTAGCTGATAATATAAATAAGACTTCTTTGTTGGAACTCATTGTTCATGGAAA TAAACAAAATTCCAGTGGCTATGCCTTTTCTGTGCTAGTTGAGTTGCTCTTTCTTGATAGAAGAACCAAGATTTTAAACTTCTTAAGAGGGATTAAAGAT GGATGGGCTGGCTTAAACATAATGCACATTTTCTTCATTTACCTTCAGAAGGCTCCACCCGAAGAACGCCCCTTCGTTGCAGTGATATTATTGCTGCTTG ATCATATGTTGTGTTGCAGGAAGATCCTTTGAAGGGAAGTTTATATAGAGAAGAAGCAATTGATGCAATTGTAGCCACTTTAAATAATCAAATATGTAAT GATAGAGTTCAGGAGCAATCAGCCAAAGCTCTACTCTTATTAGGAGGCCACTTTTCTTGCAGAGGAGAATCACTAATGGAAAAATGGCTTTTACAACAAG CCGGTTTTCGAGAAATTTCCTTAGAAGATTCATTTCCCGGCAACGAAATTATTGTTCATGATGCACTCTTCAATACTAAGGAGGAAGAAGATGAAAGTTG GCAACAAAGAGCAGCTTGTATCTTGTTCAAAAGTGGAAACAAGAATTTGCTGTCAGCACTTGCAGATTCAATAGCCAATAGCATTCCATGTTTAGCACGT GCGAGTCTTGTAACTATTTCATGGATGAGCAACTACCTCCACTTAGTTGAAGGTAGAAACTTGCCACAAATGGCTCTATCAATCTTAAGGCCACAGTTGC TACAATCATTGAATTATGATAAAGATGTTGAGGAAAGAGTGCTAGCTTCATATTCATTGCTCTCTCTAACCAAAAGTTCAGCATGTGTCTATGTCCTACC ATCAATGGATAAACACTCACTAAGAAATCTCAGAAATCTGTCTCTAGTGACTTGGACTGCAAATGAACTTATCTCAATCATCTCAAAAAGTAGCTTGCAA TCAAGACAATGATAAGCTGAATCTGTCAATGTTCATTCTTTCATATAAAGGTTACTACTGTAATCACCCTTGAATTTTTGTATAGTTGATTAGTTTGAAA TGGAATATTATGCACCAAGAAACATAATATTTGTTTTTTCCATGGTATAGCTTATTATGATGAAGTTCATGATCTGAAAAACTTGTTTAGCCTAAACAAG AAAGCAGCTACAGAAAAGTGACAAAACACTAAAAAGTAAAAAC
• Tissue: pods
• Gene name: LI_gene_164853;
• Additional information: details;

Expression of Ll_transcript_284861

FPKM

• PAB: 0.2
• PNAB: 0.1
• PS1: 0.5
• PS2: 0
• PS3: 0
• PW1: 0.2
• PW2: 0.7
• PW3: 1.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_284861

• Blastp: Putative E3 ubiquitin-protein ligase LIN-2 from Lotus with 32.35% of identity
• Blastx: Putative E3 ubiquitin-protein ligase LIN-1 from Lotus with 31.76% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419626.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;