| Id Trinity | TRINITY_DN48894_c1_g1_i17 |
|---|---|
| Name Transcript | Ll_transcript_284880 |
| Sequence | ATTTGTTGTAACTCATTCGTGTAAATGAGTGTACATTATCTATTGTTCTTCTTTTCTTTTACTTAAACCGTAGGTAAAAACCTGGTACGTTCCTTAAAAG GAATCACTTCATAAAAAAACCACGAATTGGTACGAGATAACGAATTTGCCGTTCTCTACCAAAACGAGATAATTATGTTCTATGGAGAAAACCTCATTTT ATTAAATTTAACTCTGACAATATTCAAAGGGTGATGCTAATAACTCTTACTTTTTGCATCAGCATCGATATTACGGTAAATCAATACCATTTGGATCCAG GGAAGAAGCATTCAAGAATGCAAGCACTATTGGTTATTTCAACTCAGCTCAAGCCATTGCAGATTATGCAGAAGTTCTCATACATATAAAGAAAACATTA CATGCTGAAAAGTCTCCAATTATTGTCCTTGGAGGATCATATGGTGGAATGCTTGCTACATGGTTTAGATTGAAATACCCTCACCTAACAATTGGTGCAT TAGCCTCATCAGCTCCAATTCTCTACTTTGATTATATTACACCACCAAATTCTTACTATGATGTTGTCACAAGGGATTTTCGAGAAGCTAGTGAGAAATG CTATGAAACTATTAGAAAGTCTTGGTCTGAAATTGATAGAGTAGCTTCTCAAACAAATGGTCTTTCCAGTCTTAGCCATATATTCAATACTTGCAACCCC TTAAATAATTCTTCTAGCCTGAAAGAGTACCTGTACTCTGTGTATACTTCGGCTGCTCAATACAATAGACCGCCGCAATATCCGGTTACCGTGATATGTG GTGGCATTGATGGAGCTTCTTCTAAAAGTGACATCCTTAGTAAGATAAATGCAGGTTTAGTAGCATACAAGGGAGACAAAACATGCAAAGTTAATGGCCC TACTAATGTATCTGAGACAAACATGGGTTGGAAATGGCAGAGATGTAGTGAATTTGTGTTACCTATTGGGATAGGAAATAATAGCATGTTCGAACCTAAC CCATTCAGCTTAGAACTCTATACCAATGAGTGCAAAAAACACTTTGGTGTCTCACCTCGTCCTCATTGGATCACTACTTACTATGGAGGCTATGATATAA AATTGGTCCTTAAAAGGTTTGGTAGCAACATCATTTTCTCAAATGGGCTAAAAGACCCTTATAGTAGTGGAGGGTAAGCATTGTAAAAACAACAAAAGAT ACATAGATCTGAATTCAAGAGATGGAACTGAAAATCAGACCGGACCAGATTGATCGATTTTTTAAAAAAAAGTCAATTACAGTCCAAACACTTTCGGTTT TGTGATTTTGACCTATTTTGGATCGGTTTTCGGTTTTATTTTTGGACCGGTCTGGATTTCAACACCCCTAATTTATATTACGTTAAATTAAGCAACTTTT ATGTTATTAATCTTCTATACATTTCAGGGTTCTAGACAACATATCAGACAATCTTGTTGCCCTAAATACAGTTAATGGTATACCTTCTTTTTCAATCAAT ATATTGTAATTATCATTATATTAGAATACACCATTTTTTCCTTTGGTTTATATCTATTTATGTAATTGTTTTGAGGATTTGTCTATAGCTTCAAATGATT TAACTATTTTCCGAATTTATTTTTAATAAAAAACATATTTCATATCTTAATCATACATTCTATGAAAATCTAATAATTTAAATTAACGATTAAATCTGGA CTATTAAATTTTCTTAAAATGAATGATTAAGATATATAATACGTTGTTTAACTTACTCATGGAGTAAGTGAATCATCTTTTTTTCAATATATATTTAATG ACTTTTATCAATAGTTCTATTAAAAGTAGAAAAAAAATTG BLAST |
| Tissue | pods |
| Gene name | LI_gene_164856; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_284880
| Blastp | Lysosomal Pro-X carboxypeptidase from Mus with 39.77% of identity |
|---|---|
| Blastx | Lysosomal Pro-X carboxypeptidase from Mus with 41.18% of identity |
| Eggnog | Lysosomal Pro-X(ENOG410Y38A) |
| Kegg | Link to kegg annotations (72461) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019436307.1) |
| Pfam | Serine carboxypeptidase S28 (PF05577.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |