Id Trinity | TRINITY_DN48896_c0_g1_i5 |
---|---|
Name Transcript | Ll_transcript_285222 |
Sequence | CTACAATACAATACACGTTTCAACTCTCATCACGCATTCACACATACCCGACCGAATCAAATCAAGCTCAACCTTCATGGTGTGTTCGATTGGCTTACGC ATTTTCCCAAACACTTGGTGTGCCCATGCGTCCTCTTCATCAATTCTTCTACACTGACACTCAATTTCTTACTTCTACACATCAATGAGGTGGGATGCCT TCACCGCTCTCTACCGTCACCGTCGTACCATTACAAATCTACAGCACGAGAGTGCCACTAGAATTATCTTACGCAAATGTGTGCCACTTGGATATCTGAA ACATATTGAGGTGGTAAAGAGGTTGAATTGCTTGTCCCCGTCTTGCTTGTTGCTCCAAAATTCATATTCAACTGGTTTCACTAGTGTGCATGGTGAAACA CCATCTGCCGAGTATGCAAAGAGGAGGAGGGAATCACTGGAAAATCAATTTGGGCGTGCTCTTGGAGCTAATAGCTCCAGGAGTTTTAATGCTATCTACC GGTTTGGCCCGTTTTTGGCTTTGTACAGGGCAGCAATCATTTCATTTCATGTCTTAAGGTTATCAATATGGCAGATGTTTGTTCAAGACCCAAAAGAACG TGCAACCAAGTTTCGTGAAACTCTAATACGCTTGGGCCCTTTCTACACTAAGCTTGGGCAGGCACTGAGCACTAGGCCTGACATATTACCCACAGTATAC TGCCAAGAACTTGCTAAGTTACAGGATCAAATACCCCCATTTCCAACTGACATCGCAATCAGATCTATTGAAGCTCAATTTGGCATTCCTATTGCTGAAA TTTTTAGTGACATCAGTCCTGCACCTATTGCAGCAGCATCCTTAGGCCAAGTTTATAAAGTGTTGCAGCTCACCTGCTTTCTGGAGAACTGGTAGCTGTA AAAGTACAGAGGCCCGGTATGTCACTTTCATTAACCCTGGATGCCTTGTTATTCCATATGATGGGGGGGCAGTTAAAACGATTCGCCAAGGCTCGCAAAG ATCTTTTGGTAGCAGTGAATGAGATGGTGAGTTCCTTTACTACAAATACAACACAAAGATCACTTGGTTGCTTCGTAGATGACCTATTTTTCACCTAACA TTTGCAAACTAAAAACTGAACCCCACTTTAGAATATACAAATTTCTGCTGTGTGCACGTGTGTTTTATAACTATACTAGCTGGCTTTTGTGGAGACTGTT ATGTCTCGGTTTACATTGGCATTGCTTCATGTATTAGTTATTGTGGCTTAATGTAACAGGTCAGACACATGTTTGATGAAATTGATTATGTCCTAGAGGG GAAAAATGCTGAGCGCTTTGCTTCTCTCTACTGTATGTCTGCAAGTAAGTTCAAAGTAGGTGCGAAAAGTGCTACATGTTATTTTCTTGGATGATATATT TGGCATGTGCAGAACTCAACCAGTTGTTTCAATCCCAAAATACAAAGTTTAGATAATTCCCAACCAAATCTTGTTACTTGAGATAGCTGCCCTAAAATTA TTAATCTTAGTTTCCGAGTTATATACATAGGAAGATCCTTGCTTATATTCAGAGCTGATAGTTTTTCCTCCAATATGAGAATGGAAGAAGGCAGCATGCA TGCTTAAGTTATGGACTGAACATTTTTGTCACTTGAAAATGACGCTAAGTCTTGACCATGCAATTTTGAGTGGTGGCTCTTTTCAAGAAGTGGTAATGAA CAGGGCCACAAAAAATGCAGGTGGAGGCAATATTAGGCACAAAAGAGTGAAGTCTGTCAAAGCTCCAAAGATATATTGGGACTATACATGTACCACTGTA CTGACTATGGAATGGATAGATGGAATTAAGCTTACGGATGAAACAAGGTTAAATAATGCTTCTTTGAACAGAAGAGAACTCATTGACCAGGGATTATACT GCTCTTTGAGGCAACTGCTAGAGGTTGGGTATTTCCATGCCGATCCTCATCCAGGAAACCTGGTTGCATTAGGTGATGGATCACTAGCATATTTTGACTT TGGAATGATGGGGGATATTCCTAGGCATTACCGGATTGGACTTATTCAAATGATTGTGCATTTTGTTAATCGTGACTCTCTGAGTTTGGCAAATGACTTC CTTTCTTTAGGATTTATTCCTGAAGGAGTTGACATACATTCAGTCTCTAATGCACTGCAAGCATCATTTACAGATCGGACTGGTGAATCTCAAGATTTCC AGGGAATTATGAACCAACTATATGATGTCATGTATGAATTTAACTTCTCTCTCCCACCAGACTATGCTCTTGTTATAAGATCATTGGGATCACTAGAGGG CACAGCTAAAGTCCTGGATCCTGGTTTTAAGGTCATTGAGAGTGCATATCCTTTTGTCATTGGGAGACTTATTGCAGACCCGAGTCCTGATATGAGAAGA ATTTTGAGGGAACTTCTCATTCGTAACAATGGGTCCATAAGGTGGAACCGGCTAGAGCGCTTAATAGCAGCAATATCTGAACAGGCTTCTGAGTTAATTG GAGACCCTAGTTCTGAAAAACTTTCAAGTCCATCCGTTTGGAAATTATTTGACATGCCAGCTGTTGTTGATTCCACTGAAGATCTTTTGTTATTCATATT ATCAGACAAGGGTCTGAGAGTGCGTCATTTCCTTCTTCGGGATATATTAGAAGCAGCTGATGCATTTCTGCAAGATGAAGTGATTAACTGTGTGCTAAAT GATAAACCTGAAGGCCAGCGGATATTGTTATTTGAGGAGCGTCCTTTCCTTGGTAGGATTGGGAAGGGCTTTCAATATCTTTCCGAGGTGGTTAAGTTAG CACCAGAGGAGTGGGCAGCAATGCTTATACGAATGGCAGGGAAGCCTGAGGTTCACAGATTTGCTTCAGACATTATTTCAGCTTTAGTCTGGAACTCCAG CCACAAATTGCAGGAAGCTTCTTGGCTCTATTTATCAAAACTCCTTCACAAATTGTCAAAAAAGGAGGTAGATTAGAAATACTGCAGTTGAAATTCCTGG ACAAGAAGTGAGCCAAAATTTCCTTGCACTCCTAGTTTGAAGGTTCCATCTAATCACACACGACTTCCAAATTTTACTAAGAATTTTTTACAATTATAAA GAAAATTGTTTGATGAATTATCTTTTACTTTTAGTGACATTTTGCCTATTTTGTTCATTGATGTATAGATATATCTACATGATATGGGTCGACTATTTTA GATTAATGAAGTTAATTTTTGTTTTGCTCAAAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_164879; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_285222
Blastp | Uncharacterized protein sll0005 from Synechocystis with 37.05% of identity |
---|---|
Blastx | Uncharacterized protein sll0005 from Synechocystis with 36.27% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (sll0005) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019415552.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |