Ll_transcript_285228

• Id Trinity: TRINITY_DN48896_c0_g1_i9
• Name Transcript: Ll_transcript_285228
• Sequence: CTACAATACAATACACGTTTCAACTCTCATCACGCATTCACACATACCCGACCGAATCAAATCAAGCTCAACCTTCATGGTGTGTTCGATTGGCTTACGC ATTTTCCCAAACACTTGGTGTGCCCATGCGTCCTCTTCATCAATTCTTCTACACTGACACTCAATTTCTTACTTCTACACATCAATGAGGTGGGATGCCT TCACCGCTCTCTACCGTCACCGTCGTACCATTACAAATCTACAGCACGAGAGTGCCACTAGAATTATCTTACGCAAATGTGTGCCACTTGGATATCTGAA ACATATTGAGGTGGTAAAGAGGTTGAATTGCTTGTCCCCGTCTTGCTTGTTGCTCCAAAATTCATATTCAACTGGTTTCACTAGTGTGCATGGTGAAACA CCATCTGCCGAGTATGCAAAGAGGAGGAGGGAATCACTGGAAAATCAATTTGGGCGTGCTCTTGGAGCTAATAGCTCCAGGAGTTTTAATGCTATCTACC GGTTTGGCCCGTTTTTGGCTTTGTACAGGGCAGCAATCATTTCATTTCATGTCTTAAGGTTATCAATATGGCAGATGTTTGTTCAAGACCCAAAAGAACG TGCAACCAAGTTTCGTGAAACTCTAATACGCTTGGGCCCTTTCTACACTAAGCTTGGGCAGGCACTGAGCACTAGGCCTGACATATTACCCACAGTATAC TGCCAAGAACTTGCTAAGTTACAGGATCAAATACCCCCATTTCCAACTGACATCGCAATCAGATCTATTGAAGCTCAATTTGGCATTCCTATTGCTGAAA TTTTTAGTGACATCAGTCCTGCACCTATTGCAGCAGCATCCTTAGGCCAAGTTTATAAAGTGTTGCAGCTCACCTGCTTTCTGGAGAACTGGTAGCTGTA AAAGTACAGAGGCCCGGTATGTCACTTTCATTAACCCTGGATGCCTTGTTATTCCATATGATGGGGGGGCAGTTAAAACGATTCGCCAAGGCTCGCAAAG ATCTTTTGGTAGCAGTGAATGAGATGGTGAGTTCCTTTACTACAAATACAACACAAAGATCACTTGGTTGCTTCGTAGATGACCTATTTTTCACCTAACA TTTGCAAACTAAAAACTGAACCCCACTTTAGAATATACAAATTTCTGCTGTGTGCACGTGTGTTTTATAACTATACTAGCTGGCTTTTGTGGAGACTGTT ATGTCTCGGTTTACATTGGCATTGCTTCATGTATTAGTTATTGTGGCTTAATGTAACAGGTCAGACACATGTTTGATGAAATTGATTATGTCCTAGAGGG GAAAAATGCTGAGCGCTTTGCTTCTCTCTACTGTATGTCTGCAAGTAAGTTCAAAGTAGGTGCGAAAAGTGCTACATGTTATTTTCTTGGATGATATATT TGGCATGTGCAGAACTCAACCAGTTGTTTCAATCCCAAAATACAAAGTTTAGATAATTCCCAACCAAATCTTGTTACTTGAGATAGCTGCCCTAAAATTA TTAATCTTAGTTTCCGAGTTATATACATAGGAAGATCCTTGCTTATATTCAGAGCTGATAGTTTTTCCTCCAATATGAGAATGGAAGAAGGCAGCATGCA TGCTTAAGTTATGGACTGAACATTTTTGTCACTTGAAAATGACGCTAAGTCTTGACCATGCAATTTTGAGTGGTGGCTCTTTTCAAGAAGTGGTAATGAA CAGGGCCACAAAAAATGCAGGTGGAGGCAATATTAGGCACAAAAGAGTGAAGTCTGTCAAAGCTCCAAAGATATATTGGGACTATACATGTACCACTGTA CTGACTATGGAATGGATAGATGGAATTAAGCTTACGGATGAAACAAGGTTAAATAATGCTTCTTTGAACAGAAGAGAACTCATTGACCAGGGATTATACT GCTCTTTGAGGCAACTGCTAGAGGTTGGGTATTTCCATGCCGATCCTCATCCAGGAAACCTGGTTGCATTAGGTGATGGATCACTAGCATATTTTGACTT TGGAATGATGGGGGATATTCCTAGGCATTACCGGATTGGACTTATTCAAATGATTGTGCATTTTGTTAATCGTGACTCTCTGAGTTTGGCAAATGACTTC CTTTCTTTAGGATTTATTCCTGAAGGAGTTGACATACATTCAGTCTCTAATGCACTGCAAGCATCATTTACAGATCGGACTGGTGAATCTCAAGATTTCC AGGGAATTATGAACCAACTATATGATGTCATGTATGAATTTAACTTCTCTCTCCCACCAGACTATGCTCTTGTTATAAGATCATTGGGATCACTAGAGGG CACAGCTAAAGTCCTGGATCCTGGTTTTAAGGTCATTGAGAGTGCATATCCTTTTGTCATTGGGAGACTTATTGCAGACCCGAGTCCTGATATGAGAAGA ATTTTGAGGGAACTTCTCATTCGTAACAATGGGTCCATAAGGTGGAACCGGCTAGAGCGCTTAGTATGGTTTCTCACTACCTTTCTACTCTGCTAAACAT TGTAATTGTTATGTGGATATGCTAATTATAATATTGCTTGAAAGTAACTCACAAGTTGTAAGATGAAACTGACAAGGTTGAAGTTTTACTATTTTATCCT CTCTGTATCACAAGGATAATAACTTCTACGAGTAGAAGGAGCTTCCCTTTGACGTTTGTGCTTCACGTAACATCAATCTATGGACTAATCTATTTGTGCA CTTGCTCTGGAAAGTTTGAAACCCTATATCACTCATATTAGTAATTTCACAATTGTTGCCTAGAGCGAATCATGTTATAATTTTACAAGCAGTATTTTGC TATTTTTCCCTATTTAGAAATAAGCACACATTTTTAGGGTGGAAATTCCTAAGATCCTAGCCCTCTGCAGTAATTTTTTTGGAGCATTAGCATTACAATG CAGACCCCATTTATTTCTGCACTCAATTTTGATTTATCTTGTATTCTCGTGCATGAAGTTACTATATAGTTTTGGACTATATTTAATATTGATTTCATTC TTGTTTCAGATAGCAGCAATATCTGAACAGGCTTCTGAGTTAATTGGAGACCCTAGTTCTGAAAAACTTTCAAGTCCATCCGTTTGGAAATTATTTGACA TGCCAGCTGTTGTTGATTCCACTGAAGATCTTTTGTTATTCATATTATCAGACAAGGGTCTGAGAGTGCGTCATTTCCTTCTTCGGGATATATTAGAAGC AGCTGATGCATTTCTGCAAGATGAAGTGATTAACTGTGTGCTAAATGATAAACCTGAAGGCCAGCGGATATTGTTATTTGAGGAGCGTCCTTTCCTTGGT AGGATTGGGAAGGGCTTTCAATATCTTTCCGAGGTGGTTAAGTTAGCACCAGAGGAGTGGGCAGCAATGCTTATACGAATGGCAGGGAAGCCTGAGGTTC ACAGATTTGCTTCAGACATTATTTCAGCTTTAGTCTGGAACTCCAGCCACAAATTGCAGGAAGCTTCTTGGCTCTATTTATCAAAACTCCTTCACAAATT GTCAAAAAAGGAGGTAGATTAGAAATACTGCAGTTGAAATTCCTGGACAAGAAGTGAGCCAAAATTTCCTTGCACTCCTAGTTTGAAGGTTCCATCTAAT CACACACGACTTCCAAATTTTACTAAGAATTTTTTACAATTATAAAGAAAATTGTTTGATGAATTATCTTTTACTTTTAGTGACATTTTGCCTATTTTGT TCATTGATGTATAGATATATCTACATGATATGGGTCGACTATTTTAGATTAATGAAGTTAATTTTTGTTTTGCTCAAAAAA
• Tissue: pods
• Gene name: LI_gene_164879;
• Additional information: details;

Expression of Ll_transcript_285228

FPKM

• PAB: 0
• PNAB: 0.2
• PS1: 0
• PS2: 0.3
• PS3: 0.2
• PW1: 0.2
• PW2: 0.3
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_285228

• Blastp: Uncharacterized protein sll0005 from Synechocystis with 48.15% of identity
• Blastx: Uncharacterized protein sll0005 from Synechocystis with 43.7% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (sll0005)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019415552.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;